RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 TWF1Q12792 350 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 MAB21L1Q13394 359 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 GINS1Q14691 196 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 CHRNA6Q15825 494 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 MRPL23Q16540 153 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 UBE2SQ16763 222 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 CCNJQ5T5M9 372 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 DNAJC24Q6P3W2 148 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 IGFL3Q6UXB1 125 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 BIVMQ86UB2 503 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 ZNF695Q8IW36 515 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 NOXO1Q8NFA2 376 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 SLC38A4Q969I6 547 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 ZNF578Q96N58 590 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 SLC25A2Q9BXI2 301 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 PARP12Q9H0J9 701 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 NECAP2Q9NVZ3 263 aa3.25□□□□□ -1.89
TRAPPC13-206ENST00000504751 MYO10Q9HD67 2058 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 MROH7-TTC4A0A0A0MT08 1334 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 SERTM2A0A1B0GWG4 89 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 H0YIV9 168 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 L7N2F9 121 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 RP2O75695 350 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 GABARAPO95166 117 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 POLR2MP0CAP2 368 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 PGAM1P18669 254 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 GPX4P36969 197 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 TGM3Q08188 693 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 TCP10Q12799 353 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 PON2Q15165 354 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 C9orf135Q5VTT2 229 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 FAM71E1Q6IPT2 247 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 CEMP1Q6PRD7 247 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 IQCKQ8N0W5 287 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 PGAM4Q8N0Y7 254 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 BBS5Q8N3I7 341 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 ZNF321PQ8N8H1 164 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 OR52K1Q8NGK4 314 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 OR5B12Q96R08 314 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 ZNF430Q9H8G1 570 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 GPATCH2LQ9NWQ4 482 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 ZNF222Q9UK12 451 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 PSME2Q9UL46 239 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 YTHDF2Q9Y5A9 579 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 KCNE3Q9Y6H6 103 aa3.24□□□□□ -1.89
TRAPPC13-206ENST00000504751 MAPK8IP3Q9UPT6 1336 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 IGKV2-28A0A075B6P5 120 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 SMCO3A2RU48 225 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 LRCOL1A6NCL2 159 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 CACNG3O60359 315 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 CTDNEP1O95476 244 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 IGKV2D-28P01615 120 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 KRT14P02533 472 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 HLA-DPB1P04440 258 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 BCHEP06276 602 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 ACSM4P0C7M7 580 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 OR5H8P0DN80 308 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 IGHV1-8P0DP01 117 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 ANXA8P13928 327 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 CEACAM6P40199 344 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 CSNK1A1P48729 337 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 RAB10P61026 200 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 RAP1AP62834 184 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 ZNF726P1Q15940 193 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 HADHQ16836 314 aaKnown RBP3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 PTPN20Q4JDL3 420 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 HSP90B2PQ58FF3 399 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 SOHLH1Q5JUK2 328 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 PPM1LQ5SGD2 360 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 ANXA8L1Q5VT79 327 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 PRELID2Q8N945 189 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 OR5W2Q8NH69 310 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 UBALD1Q8TB05 177 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 ABHD3Q8WU67 409 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 SEH1LQ96EE3 360 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 PDXPQ96GD0 296 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 ZNF681Q96N22 645 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 SAV1Q9H4B6 383 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 UVRAGQ9P2Y5 699 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 PITPNC1Q9UKF7 332 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 PIKFYVEQ9Y2I7 2098 aa3.23□□□□□ -1.89
TRAPPC13-206ENST00000504751 IGSF9BQ9UPX0 1349 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 AKNAQ7Z591 1439 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 IGHV5-10-1A0A0J9YXX1 117 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 TRBV11-1A0A0K0K1C0 115 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 TCP11X1B4DZS4 312 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 SIRPB1O00241 398 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 AIM2O14862 343 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 EIF3HO15372 352 aaKnown RBP eCLIP3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 RNF113AO15541 343 aaKnown RBP3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 FTH1P02794 183 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 CD9P21926 228 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 DCKP27707 260 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 RRM2P31350 389 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 OTX1P32242 354 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 NAMPTP43490 491 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 RND2P52198 227 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 SYCNQ0VAF6 134 aa3.22□□□□□ -1.89
TRAPPC13-206ENST00000504751 SELENBP1Q13228 472 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms