RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 LMX1AQ8TE12 382 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 MNTQ99583 582 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 GPR27Q9NS67 375 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 EPHA6Q9UF33 1036 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 FARSAQ9Y285 508 aaKnown RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 LOC101059948A0A1B0GTJ6 334 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 TUBAL3A6NHL2 446 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 TMEM150CB9EJG8 249 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 OR4E1P0C645 316 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 ZNF28P17035 718 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 HTR2CP28335 458 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 TAGLNQ01995 201 aaKnown RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 CCINQ13939 588 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 EBPQ15125 230 aaKnown RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 LY6G6FQ5SQ64 297 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 C16orf47Q6ZP98 133 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 HDDC2Q7Z4H3 204 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 OR4S1Q8NGB4 309 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 SLC25A44Q96H78 314 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 CMKLR1Q99788 373 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 TPSD1Q9BZJ3 242 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 MFFQ9GZY8 342 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 PDE7BQ9NP56 450 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 COA3Q9Y2R0 106 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 EMC9Q9Y3B6 208 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 MED12Q93074 2177 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 LOC100509620A0A075B734 347 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 A0A1W2PPC1 479 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 FITM1A5D6W6 292 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 C2orf72A6NCS6 295 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 H0YIG0 161 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 RAB3DO95716 219 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 AMY2AP04746 511 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 ITGB2P05107 769 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 FMODQ06828 376 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 GK2Q14410 553 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-217ENST00000495688 SGCBQ16585 318 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 COL13A1Q5TAT6 717 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-217ENST00000495688 FDX2Q6P4F2 183 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 MAMDC2Q7Z304 686 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-217ENST00000495688 LINC00346Q8IVM7 164 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 OR1S1Q8NH92 325 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 GPR119Q8TDV5 335 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 NKD1Q969G9 470 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 ZNF587Q96SQ5 575 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-217ENST00000495688 TBL1XR1Q9BZK7 514 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 MED11Q9P086 117 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 GPR160Q9UJ42 338 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 FER1L5A0AVI2 2057 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 TRAV14DV4A0A0A6YYC5 116 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 A0A1W2PPC4 97 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 TMEM82A0PJX8 343 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 SLC22A23A1A5C7 686 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 PHYHO14832 338 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 PTGS2P35354 604 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 FASLGP48023 281 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 BLKP51451 505 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 DEFB133Q30KQ1 61 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 SCGB2B2Q4G0G5 96 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 LRFN4Q6PJG9 635 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 JAGN1Q8N5M9 183 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 OR1J2Q8NGS2 313 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 ARPC5LQ9BPX5 153 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 MESP1Q9BRJ9 268 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 PPA2Q9H2U2 334 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 PRMT8Q9NR22 394 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-217ENST00000495688 CUTCQ9NTM9 273 aa11.69□□□□□ -0.54
PTPN7-217ENST00000495688 RTTNQ86VV8 2226 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 TMED7-TICAM2A0A0A6YYA0 188 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 TMEM235A6NFC5 223 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 SDC3O75056 442 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 TPPPO94811 219 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 ACHEP22303 614 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 CFPP27918 469 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 ABCD3P28288 659 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 SLC6A8P48029 635 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 RIDAP52758 137 aaKnown RBP11.68□□□□□ -0.54
PTPN7-217ENST00000495688 ROM1Q03395 351 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 PLCXD2Q0VAA5 305 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 NKPD1Q17RQ9 610 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 LRRC37A5PQ49AS3 106 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 FAM74A1Q5RGS3 127 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 CATSPERDQ86XM0 798 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 ABCA7Q8IZY2 2146 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 SLC41A2Q96JW4 573 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 PELOQ9BRX2 385 aaKnown RBP11.68□□□□□ -0.54
PTPN7-217ENST00000495688 TMED7Q9Y3B3 224 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 FREM2Q5SZK8 3169 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 SPAG17Q6Q759 2223 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 CPAMD8Q8IZJ3 1885 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 IGKV3D-11A0A0A0MRZ8 115 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 TRIM77I1YAP6 450 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 CCSO14618 274 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 GP1BBP13224 206 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 GALNSP34059 522 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 CCR5P51681 352 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 NSDHLQ15738 373 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 CORO6Q6QEF8 472 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 SHISA6Q6ZSJ9 500 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms