RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CCL21O00585 134 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 SUPT3HO75486 399 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 TMEM50AO95807 157 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 IGHV2-5P01817 119 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 SERPIND1P05546 499 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 CSF3P09919 207 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 IGKV1-13P0DP09 117 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 CHMLP26374 656 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 HSD17B2P37059 387 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 CDKN1BP46527 198 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 NMUP48645 174 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 CRISP3P54108 245 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 FGF8P55075 233 aaPredicted RBP2.87□□□□□ -1.95
SMC4-224ENST00000494612 UCNP55089 124 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 PRMT2P55345 433 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 RPL23AP62750 156 aaKnown RBP2.87□□□□□ -1.95
SMC4-224ENST00000494612 AQP6Q13520 282 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 TGFBIQ15582 683 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 LINC00173Q6ZV60 143 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 COPS6Q7L5N1 327 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 ENTHD1Q8IYW4 607 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 NECAB1Q8N987 351 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 ZNF557Q8N988 423 aaPredicted RBP2.87□□□□□ -1.95
SMC4-224ENST00000494612 MDS2Q8NDY4 140 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 NPBQ8NG41 125 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 OR9K2Q8NGE7 335 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 OR51G1Q8NGK1 321 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 OR1N2Q8NGR9 330 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 BLOC1S5Q8TDH9 187 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 OPTNQ96CV9 577 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 DEFB129Q9H1M3 183 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 DEFB127Q9H1M4 99 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 CDC42EP4Q9H3Q1 356 aaKnown RBP2.87□□□□□ -1.95
SMC4-224ENST00000494612 NMRK1Q9NWW6 199 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 PISDQ9UG56 409 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 IKZF2Q9UKS7 526 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 WSB1Q9Y6I7 421 aa2.87□□□□□ -1.95
SMC4-224ENST00000494612 COL1A1P02452 1464 aaPredicted RBP2.87□□□□□ -1.95
SMC4-224ENST00000494612 ZSWIM8A7E2V4 1837 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 SPEF2Q9C093 1822 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 DLG5Q8TDM6 1919 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 PPIAL4EA0A075B759 164 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 CCL15-CCL14A0A0B4J2E2 113 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 CTAGE15A4D2H0 777 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 MGRN1O60291 552 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 FGGP02679 453 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 CT62P0C5K7 136 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 UQCRFS1P1P0C7P4 283 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 PNMA6AP0CW24 399 aaPredicted RBP2.86□□□□□ -1.95
SMC4-224ENST00000494612 PPIAL4FP0DN26 164 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 SLC2A3P11169 496 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 TDGF1P13385 188 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 CCL5P13501 91 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 KITLGP21583 273 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 GPR6P46095 362 aaPredicted RBP2.86□□□□□ -1.95
SMC4-224ENST00000494612 NPBWR2P48146 333 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 RORCP51449 518 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 TDGF1P3P51864 188 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 SUB1P53999 127 aaKnown RBP eCLIP2.86□□□□□ -1.95
SMC4-224ENST00000494612 MECOMQ03112 1051 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 MADCAM1Q13477 382 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 CUL2Q13617 745 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 CCL15Q16663 113 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 RSPO1Q2MKA7 263 aaPredicted RBP2.86□□□□□ -1.95
SMC4-224ENST00000494612 RNASEKQ6P5S7 137 aaKnown RBP2.86□□□□□ -1.95
SMC4-224ENST00000494612 NANOGNBQ7Z5D8 188 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 CTAGE6Q86UF2 777 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 LHFPL3Q86UP9 236 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 EGFL6Q8IUX8 553 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 HSD17B11Q8NBQ5 300 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 TRPV1Q8NER1 839 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 OR2G3Q8NGZ4 309 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 OR6X1Q8NH79 312 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 MARCH1Q8TCQ1 289 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 MCOLN3Q8TDD5 553 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 GEMIN6Q8WXD5 167 aaKnown RBP2.86□□□□□ -1.95
SMC4-224ENST00000494612 FAM104AQ969W3 186 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 SDHCQ99643 169 aaPredicted RBP2.86□□□□□ -1.95
SMC4-224ENST00000494612 GABARAPL3Q9BY60 117 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 MFFQ9GZY8 342 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 DNTTIP1Q9H147 329 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 PRO3102Q9H379 93 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 UGT1A7Q9HAW7 530 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 UGT1A10Q9HAW8 530 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 UGT1A8Q9HAW9 530 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 XCL2Q9UBD3 114 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 N6AMT1Q9Y5N5 214 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 ECM29Q5VYK3 1845 aa2.86□□□□□ -1.95
SMC4-224ENST00000494612 COL4A1P02462 1669 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 OTOFQ9HC10 1997 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 A0A1W2PPE3 182 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 PRSS37A4D1T9 235 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 PES1O00541 588 aaKnown RBP2.85□□□□□ -1.95
SMC4-224ENST00000494612 KLHL41O60662 606 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 HOXA9P31269 272 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 PLP1P60201 277 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 KCNJ2P63252 427 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 GTF3C1Q12789 2109 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 SMARCB1Q12824 385 aa2.85□□□□□ -1.95
SMC4-224ENST00000494612 GGTLC2Q14390 218 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms