RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SNRPGP62308 76 aaKnown RBP11.45□□□□□ -0.58
ERCC3-209ENST00000494464 RAB39AQ14964 217 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 RASSF6Q6ZTQ3 369 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 PRSS48Q7RTY5 328 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 RNF113BQ8IZP6 322 aaKnown RBP11.45□□□□□ -0.58
ERCC3-209ENST00000494464 SVOPQ8N4V2 548 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 CLDN22Q8N7P3 220 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 OR4F15Q8NGB8 312 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 OR13F1Q8NGS4 319 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 PFN4Q8NHR9 129 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 TMEM255BQ8WV15 326 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 TMEM54Q969K7 222 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 MUL1Q969V5 352 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 TMIGD2Q96BF3 282 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 SLC25A44Q96H78 314 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-209ENST00000494464 MYCBPQ99417 103 aaPredicted RBP11.45□□□□□ -0.58
ERCC3-209ENST00000494464 FOXB1Q99853 325 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 YIPF3Q9GZM5 350 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 CA10Q9NS85 328 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 PTTG2Q9NZH5 202 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 MED31Q9Y3C7 131 aa11.45□□□□□ -0.58
ERCC3-209ENST00000494464 HTR3EA5X5Y0 456 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 NPIPB13A6NJU9 1138 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 CENPBD1B2RD01 187 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 NPIPB4C9JG80 1138 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 H3BN98 237 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 RGS10O43665 173 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 OR7A10O76100 309 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 HIST1H2ABP04908 130 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 PGA4P0DJD7 388 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 PGA3P0DJD8 388 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 PCMT1P22061 227 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 DCKP27707 260 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 RPL18Q07020 188 aaKnown RBP11.44□□□□□ -0.58
ERCC3-209ENST00000494464 NEDD8Q15843 81 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 SMN1Q16637 294 aaKnown RBP11.44□□□□□ -0.58
ERCC3-209ENST00000494464 SWI5Q1ZZU3 235 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 ZNF813Q6ZN06 617 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 HIST3H2AQ7L7L0 130 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 RRM2BQ7LG56 351 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 HDDC2Q7Z4H3 204 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 MDP1Q86V88 176 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 MYPOPQ86VE0 399 aaPredicted RBP11.44□□□□□ -0.58
ERCC3-209ENST00000494464 ZNF540Q8NDQ6 660 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 NUP37Q8NFH4 326 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 IL17RDQ8NFM7 739 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
ERCC3-209ENST00000494464 SGCDQ92629 289 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 HIST1H2ACQ93077 130 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 UBE2FQ969M7 185 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 SGTBQ96EQ0 304 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 GPA33Q99795 319 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 ZNF442Q9H7R0 627 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 SEC61A2Q9H9S3 476 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 C20orf141Q9NUB4 165 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 B3GNT2Q9NY97 397 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 GLTPQ9NZD2 209 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 PSORS1C1Q9UIG5 152 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 CR1P17927 2039 aa11.44□□□□□ -0.58
ERCC3-209ENST00000494464 IGHV2OR16-5A0A0B4J2B6 119 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 CCDC160A6NGH7 325 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 PTGES3LE9PB15 166 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 BLOC1S5-TXNDC5H3BN57 136 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 H3BSA7 217 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 SOX14O95416 240 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 CELA3BP08861 270 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 PIPP12273 146 aaPredicted RBP11.43□□□□□ -0.58
ERCC3-209ENST00000494464 B4GALT1P15291 398 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 POU1F1P28069 291 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 CALCRP30988 508 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 CAPZA2P47755 286 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 NUDT6P53370 316 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 DSCR9P59020 149 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 CDK5Q00535 292 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 MELKQ14680 651 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 EFNB3Q15768 340 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 GSG1Q2KHT4 349 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 SLC25A30Q5SVS4 291 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 OR8J1Q8NGP2 316 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 TEX47Q8TBZ9 253 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 FCGR1BQ92637 280 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 MYDGFQ969H8 173 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 Q96MT0 163 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 TSC22D3Q99576 134 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 DOK1Q99704 481 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 PRRG3Q9BZD7 231 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 ZNF224Q9NZL3 707 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 CNOT2Q9NZN8 540 aaKnown RBP11.43□□□□□ -0.58
ERCC3-209ENST00000494464 ERVK-18Q9QC07 812 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 AASSQ9UDR5 926 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 TMEM5Q9Y2B1 443 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 PMF1-BGLAPU3KQ54 211 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 ARFGEF3Q5TH69 2177 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 ALPK2Q86TB3 2170 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 ZANQ9Y493 2812 aa11.43□□□□□ -0.58
ERCC3-209ENST00000494464 A0A1W2PRG6 482 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 EFCAB10A6NFE3 127 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 SSX4O60224 188 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 UBL3O95164 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms