RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	ABHD6	Q9BV23	337 aa		13.1	□□□□□ -0.31
COPS7B-222	ENST00000492423	NELFA	Q9H3P2	528 aa		13.1	□□□□□ -0.31
COPS7B-222	ENST00000492423	LAMP5	Q9UJQ1	280 aa		13.1	□□□□□ -0.31
COPS7B-222	ENST00000492423	BAHCC1	Q9P281	2608 aa		13.1	□□□□□ -0.31
COPS7B-222	ENST00000492423	ZNF587B	E7ETH6	402 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	PRRG2	O14669	202 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	TNFSF13	O75888	250 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	CEACAM8	P31997	349 aa	Predicted RBP	13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	TIMP3	P35625	211 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	LIPA	P38571	399 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	LSM6	P62312	80 aa	Known RBP	13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	ACSM1	Q08AH1	577 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	SGCA	Q16586	387 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	ARMCX4	Q5H9R4	360 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	SLC18B1	Q6NT16	456 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	TMPRSS11A	Q6ZMR5	421 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	C3P1	Q6ZMU1	363 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	OR10S1	Q8NGN2	331 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	OR52N5	Q8NH56	324 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	GATAD2B	Q8WXI9	593 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	MAP6	Q96JE9	813 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	MGLL	Q99685	303 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	FOXB1	Q99853	325 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	ZNF416	Q9BWM5	594 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	ISYNA1	Q9NPH2	558 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	MALT1	Q9UDY8	824 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	CYB5R1	Q9UHQ9	305 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	MRM2	Q9UI43	246 aa	Known RBP	13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	TINAG	Q9UJW2	476 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	EMC9	Q9Y3B6	208 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423	TMEM14A	Q9Y6G1	99 aa		13.09	□□□□□ -0.31
COPS7B-222	ENST00000492423		J3QLW9	94 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	PSMD9	O00233	223 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	KRT33A	O76009	404 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	MT-ND5	P03915	603 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	CRH	P06850	196 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	HSMCR30	P0CW71	290 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	OR8G3P	P0DMU2	310 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	GLI4	P10075	376 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	B4GALT1	P15291	398 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	ZNF19	P17023	458 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	ACTA2	P62736	377 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	ACTG2	P63267	376 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	RBPJ	Q06330	500 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	EGR3	Q06889	387 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	SSX1	Q16384	188 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	TST	Q16762	297 aa	Known RBP	13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	FAM27B	Q5VT28	67 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	FBXW9	Q5XUX1	488 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	CORO6	Q6QEF8	472 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	CFAP77	Q6ZQR2	320 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	VASH1	Q7L8A9	365 aa	Predicted RBP	13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	ZNF627	Q7L945	461 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	DCXR	Q7Z4W1	244 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	BTLA	Q7Z6A9	289 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	KLB	Q86Z14	1044 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	ST6GALNAC3	Q8NDV1	305 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	THEM6	Q8WUY1	208 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	ASB17	Q8WXJ9	295 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	PELI1	Q96FA3	418 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	ZFP3	Q96NJ6	502 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	OR8B4	Q96RC9	309 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	TTYH2	Q9BSA4	534 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	SLCO1C1	Q9NYB5	712 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	UPB1	Q9UBR1	384 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	GDF2	Q9UK05	429 aa	Predicted RBP	13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	POLR1D	Q9Y2S0	133 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423	CEPT1	Q9Y6K0	416 aa		13.08	□□□□□ -0.32
COPS7B-222	ENST00000492423		E9PI62	339 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	CGA	P01215	116 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	ITGA5	P08648	1049 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	NPR2	P20594	1047 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	TTK	P33981	857 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	HIST1H3A	P68431	136 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	ARF1	P84077	181 aa	Known RBP	13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	BDH1	Q02338	343 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	ROM1	Q03395	351 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	FAP	Q12884	760 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	NFATC3	Q12968	1075 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	HIST2H3PS2	Q5TEC6	136 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	KLHL24	Q6TFL4	600 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	PLEKHG7	Q6ZR37	379 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	HIST2H3A	Q71DI3	136 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	ZFP41	Q8N8Y5	198 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	CNEP1R1	Q8N9A8	125 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	SNX33	Q8WV41	574 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	STARD4	Q96DR4	205 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	MRPL48	Q96GC5	212 aa	Known RBP	13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	NAA50	Q9GZZ1	169 aa	Known RBP	13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	PNRC2	Q9NPJ4	139 aa	Known RBP	13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	ACOXL	Q9NUZ1	547 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	GNG8	Q9UK08	70 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	GRIP1	Q9Y3R0	1128 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	IGSF10	Q6WRI0	2623 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	CACNA1C	Q13936	2221 aa		13.07	□□□□□ -0.32
COPS7B-222	ENST00000492423	SMIM31	A0A1B0GVY4	71 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms