RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 HINT3Q9NQE9 182 aaKnown RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 NANSQ9NR45 359 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF275Q9NSD4 429 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 TMEM38BQ9NVV0 291 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 GID8Q9NWU2 228 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 TAS2R5Q9NYW4 299 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 STX18Q9P2W9 335 aaKnown RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 DUSP13Q9UII6 198 aa7.82□□□□□ -1.16
HDAC3-212ENST00000492407 LEF1Q9UJU2 399 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-212ENST00000492407 MALRD1Q5VYJ5 2156 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 A0A1W2PPW3 197 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 TRAPPC13A5PLN9 417 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 DPPA5A6NC42 116 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 GMNCA6NCL1 334 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 NPIPB13A6NJU9 1138 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 DBX1A6NMT0 343 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 NPIPB4C9JG80 1138 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 LYNX1G3V0Z9 82 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 MAGEB3O15480 346 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 TXNL1O43396 289 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 SASH3O75995 380 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 BCL10O95999 233 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 IGHG1P01857 330 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 ASAH2BP0C7U1 165 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 PGA4P0DJD7 388 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 PGA3P0DJD8 388 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 LYNX1P0DP58 116 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 NR2C1P13056 603 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 GATA3P23771 443 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 LIPAP38571 399 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 ALDH3B1P43353 468 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 LIMS1P48059 325 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 SEC24CP53992 1094 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 UCP2P55851 309 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 KLF3P57682 345 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 PLP2Q04941 152 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 NPTX1Q15818 432 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 DUSP7Q16829 419 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 NKPD1Q17RQ9 610 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 TBC1D28Q2M2D7 210 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 TTMPQ5BVD1 217 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 AGBL2Q5U5Z8 902 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 RAB12Q6IQ22 244 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 TMEM154Q6P9G4 183 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 SHQ1Q6PI26 577 aaKnown RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 WDR88Q6ZMY6 472 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 TSPYL5Q86VY4 417 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 LRP11Q86VZ4 500 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 PTOV1Q86YD1 416 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 C10orf111Q8N326 155 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 SLC30A7Q8NEW0 376 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 SEMA6DQ8NFY4 1073 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 LRRC8CQ8TDW0 803 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 SNX33Q8WV41 574 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 LIPHQ8WWY8 451 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 HDAC2Q92769 488 aaKnown RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 RAB39BQ96DA2 213 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 TMEM68Q96MH6 324 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 SYT3Q9BQG1 590 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 CPPED1Q9BRF8 314 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 MRPL13Q9BYD1 178 aaKnown RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 IKZF5Q9H5V7 419 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 OCEL1Q9H607 264 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 METTL17Q9H7H0 456 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 SMURF2Q9HAU4 748 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 CDH20Q9HBT6 801 aa7.81□□□□□ -1.16
HDAC3-212ENST00000492407 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 CGGBP1Q9UFW8 167 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-212ENST00000492407 IQCMA0A1B0GVH7 501 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 TMEM89A2RUT3 159 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 FAM157AC9JC47 383 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 LRRN3E7EW58 273 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 H3BSA7 217 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 TRIM77I1YAP6 450 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 SLC22A1O15245 554 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 PPIHO43447 177 aaKnown RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 RNF13O43567 381 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ICMTO60725 284 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 LYPD3O95274 346 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 CH25HO95992 272 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 PNPP00491 289 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 IGHV3-13P01766 116 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ADH4P08319 380 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 QDPRP09417 244 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ANXA8P13928 327 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 TCN1P20061 433 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 TUBG1P23258 451 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 RBM34P42696 430 aaKnown RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF84P51523 738 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ARFIP2P53365 341 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 HILS1P60008 231 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 MRPS34P82930 218 aaKnown RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 SRSF2Q01130 221 aaKnown RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 CCNIQ14094 377 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 AANATQ16613 207 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 AGKQ53H12 422 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ENTPD8Q5MY95 495 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 C10orf128Q5T292 105 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 METTL21CQ5VZV1 264 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ERICH5Q6P6B1 374 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms