RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TRPM8Q7Z2W7 1104 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 ADCK1Q86TW2 530 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 OR9Q2Q8NGE9 314 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 NEU4Q8WWR8 484 aaPredicted RBP21.17■□□□□ 0.98
UPF3A-209ENST00000492270 SAMD8Q96LT4 415 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 ERMAPQ96PL5 475 aaPredicted RBP21.17■□□□□ 0.98
UPF3A-209ENST00000492270 BTBD10Q9BSF8 475 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 PIMREGQ9BSJ6 248 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 NUAK2Q9H093 628 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 MYOZ1Q9NP98 299 aaPredicted RBP21.17■□□□□ 0.98
UPF3A-209ENST00000492270 COA3Q9Y2R0 106 aaPredicted RBP21.17■□□□□ 0.98
UPF3A-209ENST00000492270 TIMM10BQ9Y5J6 103 aa21.17■□□□□ 0.98
UPF3A-209ENST00000492270 A0A1W2PPW3 197 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 TNFRSF11BO00300 401 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 CD5LO43866 347 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 MPZL1O95297 269 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 TP53P04637 393 aaPredicted RBP21.16■□□□□ 0.98
UPF3A-209ENST00000492270 GGTLC2Q14390 218 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 TMEM249Q2WGJ8 235 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 OR4C15Q8NGM1 316 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 GNPDA2Q8TDQ7 276 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 TSSK2Q96PF2 358 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 C1orf21Q9H246 121 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 VNN3Q9NY84 501 aa21.16■□□□□ 0.98
UPF3A-209ENST00000492270 LOC390937A0A1W2PQ73 354 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 C12orf71A8MTZ7 269 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 LYNX1G3V0Z9 82 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 NDUFS8O00217 210 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 DCTN6O00399 190 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 KHDRBS3O75525 346 aaKnown RBP21.15■□□□□ 0.98
UPF3A-209ENST00000492270 UBOX5O94941 541 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 GPANK1O95872 356 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 ERCC1P07992 297 aaPredicted RBP21.15■□□□□ 0.98
UPF3A-209ENST00000492270 LYNX1P0DP58 116 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 NAT2P11245 290 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 ZNF250P15622 560 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 SLC6A6P31641 620 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 IFNGR2P38484 337 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 RAD52P43351 418 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 NR4A2P43354 598 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 GDI2P50395 445 aaKnown RBP21.15■□□□□ 0.98
UPF3A-209ENST00000492270 HMGA2P52926 109 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 PCBD1P61457 104 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 PPP2R2BQ00005 443 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 TSPAN31Q12999 210 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 ZNF620Q6ZNG0 422 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 OR1J1Q8NGS3 322 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 SYNPRQ8TBG9 265 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 ASB9Q96DX5 294 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 THTPAQ9BU02 230 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 IFT27Q9BW83 186 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 BCL2L14Q9BZR8 327 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 MAGIXQ9H6Y5 334 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 ANK3Q12955 4377 aaKnown RBP21.15■□□□□ 0.98
UPF3A-209ENST00000492270 ABCA2Q9BZC7 2435 aa21.15■□□□□ 0.98
UPF3A-209ENST00000492270 IGLV3-9A0A075B6K5 115 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 KRT36O76013 467 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 STAMBPO95630 424 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 APEHP13798 732 aaKnown RBP21.14■□□□□ 0.97
UPF3A-209ENST00000492270 USF1P22415 310 aaPredicted RBP21.14■□□□□ 0.97
UPF3A-209ENST00000492270 KLF3P57682 345 aaPredicted RBP21.14■□□□□ 0.97
UPF3A-209ENST00000492270 SPATA46Q5T0L3 261 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 RFPL4BQ6ZWI9 263 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 ALDH16A1Q8IZ83 802 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 BPESC1Q9GZL8 116 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 EGLN3Q9H6Z9 239 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 TAAR3PQ9P1P4 343 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 MALRD1Q5VYJ5 2156 aa21.14■□□□□ 0.97
UPF3A-209ENST00000492270 HIST1H1CP16403 213 aaKnown RBP21.13■□□□□ 0.97
UPF3A-209ENST00000492270 GLO1Q04760 184 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 NKPD1Q17RQ9 610 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 TMEM255AQ5JRV8 349 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 ZNF770Q6IQ21 691 aaPredicted RBP21.13■□□□□ 0.97
UPF3A-209ENST00000492270 LEG1Q6P5S2 330 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 SYT9Q86SS6 491 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 GLB1L2Q8IW92 636 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 OR4K13Q8NH42 304 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 UBASH3BQ8TF42 649 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 C11orf40Q8WZ69 217 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 NMNAT3Q96T66 252 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 MS4A5Q9H3V2 200 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 YAE1D1Q9NRH1 226 aa21.13■□□□□ 0.97
UPF3A-209ENST00000492270 IGHV4-61A0A0C4DH41 118 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 ACOT8O14734 319 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 ARPC3O15145 178 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 DOK2O60496 412 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 NCR1O76036 304 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 HPXP02790 462 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 FAM98BQ52LJ0 330 aaKnown RBP21.12■□□□□ 0.97
UPF3A-209ENST00000492270 JAZF1Q86VZ6 243 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 ZNF786Q8N393 782 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 GTF3AQ92664 365 aaKnown RBP21.12■□□□□ 0.97
UPF3A-209ENST00000492270 TRIM15Q9C019 465 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 FN3KQ9H479 309 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 U3KQV3 271 aa21.12■□□□□ 0.97
UPF3A-209ENST00000492270 CCNB2O95067 398 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 NGFP01138 241 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 GASTP01350 101 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 IGHV4-31P0DP07 118 aa21.11■□□□□ 0.97
UPF3A-209ENST00000492270 GAAP10253 952 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms