RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 MN1Q10571 1320 aaPredicted RBP2.35□□□□□ -2.03
VTA1-204ENST00000491881 SCAF11Q99590 1463 aaKnown RBP2.34□□□□□ -2.03
VTA1-204ENST00000491881 ANKRD17O75179 2603 aaKnown RBP2.34□□□□□ -2.03
VTA1-204ENST00000491881 GLYATL1P3A0A0U1RQE8 302 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 SMCO3A2RU48 225 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 XKRY2A2RUG3 117 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 GOLGA8OA6NCC3 632 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 GOLGA8NF8WBI6 632 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 RAB29O14966 203 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 DPM1O60762 260 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 HLA-DPB1P04440 258 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 RETP07949 1114 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 ANXA5P08758 320 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 TLX1NBP0CAT3 122 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 PBLDP30039 288 aaPredicted RBP2.34□□□□□ -2.03
VTA1-204ENST00000491881 FOXN2P32314 431 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 CEACAM6P40199 344 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 TMED10P49755 219 aaKnown RBP2.34□□□□□ -2.03
VTA1-204ENST00000491881 ARG2P78540 354 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 PTPN20Q4JDL3 420 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 THEM4Q5T1C6 240 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 SLC8B1Q6J4K2 584 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 ABHD12BQ7Z5M8 362 aaPredicted RBP2.34□□□□□ -2.03
VTA1-204ENST00000491881 OR5B3Q8NH48 314 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 OR5W2Q8NH69 310 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 KIFAP3Q92845 792 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 CHAC1Q9BUX1 264 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 FGF20Q9NP95 211 aaPredicted RBP2.34□□□□□ -2.03
VTA1-204ENST00000491881 FAM49BQ9NUQ9 324 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 UVRAGQ9P2Y5 699 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 TMED5Q9Y3A6 229 aa2.34□□□□□ -2.03
VTA1-204ENST00000491881 USP47Q96K76 1375 aa2.34□□□□□ -2.04
VTA1-204ENST00000491881 RANBP2P49792 3224 aaKnown RBP2.34□□□□□ -2.04
VTA1-204ENST00000491881 WDR90Q96KV7 1748 aa2.34□□□□□ -2.04
VTA1-204ENST00000491881 GPR179Q6PRD1 2367 aa2.34□□□□□ -2.04
VTA1-204ENST00000491881 XIRP1Q702N8 1843 aaKnown RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 URB2Q14146 1524 aaKnown RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 TTC37Q6PGP7 1564 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 SMCO2A6NFE2 343 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 ZNF716A6NP11 495 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 MRPS12O15235 138 aaKnown RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 IGHDP01880 384 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 MRPL3P09001 348 aaKnown RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 ZNF735P0CB33 412 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 NAA10P41227 235 aaPredicted RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 NSG1P42857 185 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 CSNK1A1P48729 337 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 ADARB1P78563 741 aaKnown RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 LINC00483Q53H64 154 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 XKR7Q5GH72 579 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 LY6G6FQ5SQ64 297 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 SASS6Q6UVJ0 657 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 BIVMQ86UB2 503 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 ZNF695Q8IW36 515 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 PRSS58Q8IYP2 241 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 UBALD1Q8TB05 177 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 SYNPRQ8TBG9 265 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 FRZBQ92765 325 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 N4BP2L2Q92802 583 aaPredicted RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 SLC29A1Q99808 456 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 NUP58Q9BVL2 599 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 RPP21Q9H633 154 aaKnown RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 UXTQ9UBK9 157 aaPredicted RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 CTSFQ9UBX1 484 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 PSG8Q9UQ74 426 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 YTHDF2Q9Y5A9 579 aaKnown RBP2.33□□□□□ -2.04
VTA1-204ENST00000491881 NACAE9PAV3 2078 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 UHRF1BP1Q6BDS2 1440 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 ZNF292O60281 2723 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 PLB1Q6P1J6 1458 aa2.33□□□□□ -2.04
VTA1-204ENST00000491881 CENPFP49454 3210 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 PTPN13Q12923 2485 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 BRCA2P51587 3418 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 C9JVG2 144 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 SPECC1L-ADORA2AF8WAN1 911 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 LSM1O15116 133 aaKnown RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 CLOCKO15516 846 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 RNF13O43567 381 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 OR2J3O76001 311 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 CLPXO76031 633 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 SRP72O76094 671 aaKnown RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 BCHEP06276 602 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 RHOXF2BP0C7M4 288 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 IGHV1-8P0DP01 117 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 CCNB1P14635 433 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 ZNF250P15622 560 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 PSMC3P17980 439 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 RAB3BP20337 219 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 F2RP25116 425 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 RRM2P31350 389 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 AQP2P41181 271 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 CDH6P55285 790 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 PPM1LQ5SGD2 360 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 CCDC183Q5T5S1 534 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 ARMC12Q5T9G4 340 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 C9orf135Q5VTT2 229 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 SPECC1LQ69YQ0 1117 aa2.32□□□□□ -2.04
VTA1-204ENST00000491881 DUX4L9Q6RFH8 374 aaPredicted RBP2.32□□□□□ -2.04
VTA1-204ENST00000491881 Q6ZSR3 168 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms