RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 SBF1O95248 1867 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 PDCD11Q14690 1871 aaKnown RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 C2orf72A6NCS6 295 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 SERPINA2P20848 420 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 GNRHRP30968 328 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 S100A12P80511 92 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 SFTPA1Q8IWL2 248 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 OR5T1Q8NG75 326 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 OR4C3Q8NH37 302 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 FAM213BQ8TBF2 198 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 FGF13Q92913 245 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 FBXO17Q96EF6 278 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 TAF9BQ9HBM6 251 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 HIF3AQ9Y2N7 669 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 TRAV8-7A0A075B6U6 113 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 DCTN6O00399 190 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 AQP8O94778 261 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 GNB3P16520 340 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 SDHAP31040 664 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 OR1D4P47884 311 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 MEOX2P50222 304 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM255AQ5JRV8 349 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 MCATQ8IVS2 390 aaKnown RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 NUBPLQ8TB37 319 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 CNTNAP3Q9BZ76 1288 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 OR10A5Q9H207 317 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 FN3KRPQ9HA64 309 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 SPACA1Q9HBV2 294 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 PURGQ9UJV8 347 aaKnown RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 CYP8B1Q9UNU6 501 aa11.67□□□□□ -0.54
SHOX2-205ENST00000490689 COA3Q9Y2R0 106 aaPredicted RBP11.67□□□□□ -0.54
SHOX2-205ENST00000490689 MED19A0JLT2 244 aaPredicted RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 MFSD2BA6NFX1 497 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 HMSDA8MTL9 139 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF354AO60765 605 aaPredicted RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 TBX19O60806 448 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 RECKO95980 971 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 CCL5P13501 91 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 GLULP15104 373 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 CRABP1P29762 137 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 EFNB2P52799 333 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 CLINT1Q14677 625 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 AKR1C8PQ5T2L2 129 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 RGS7BPQ6MZT1 257 aaPredicted RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 SULF2Q8IWU5 870 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 SUMF2Q8NBJ7 301 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 OR51A4Q8NGJ6 313 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 AKR1E2Q96JD6 320 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 LINC00615Q96LM1 132 aaPredicted RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 SLC5A7Q9GZV3 580 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 PRR13Q9NZ81 148 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 PCYT1BQ9Y5K3 369 aaPredicted RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 PARP14Q460N5 1801 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 KNTC1P50748 2209 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 PLSCR5A0PG75 271 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 CPN1P15169 458 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 CDKN2AP42771 156 aaKnown RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 GPM6BQ13491 265 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 PPP1R1AQ13522 171 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 CCINQ13939 588 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 GUCA2BQ16661 112 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 FAM78AQ5JUQ0 283 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF660Q6AZW8 331 aaPredicted RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 DCXRQ7Z4W1 244 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 ETFBKMTQ8IXQ9 262 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 AVL9Q8NBF6 648 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 CCDC74AQ96AQ1 378 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 MRGPRX3Q96LB0 322 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 TCEAL7Q9BRU2 100 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 FBRSQ9HAH7 460 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 LOC107986453A0A1B0GWG9 222 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 CTAG2O75638 210 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 FABP1P07148 127 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF44P15621 663 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 ALOX5APP20292 161 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 GLP1RP43220 463 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 H2BFSP57053 126 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 SLC26A5P58743 744 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 NKX6-1P78426 367 aaPredicted RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 BTG2P78543 158 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 MLF2Q15773 248 aaPredicted RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM52BQ4KMG9 183 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 NHLRC3Q5JS37 347 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 SLC39A5Q6ZMH5 540 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 Q6ZRG5 221 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 GALNT16Q8N428 558 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 NXF5Q9H1B4 397 aaKnown RBP11.66□□□□□ -0.54
SHOX2-205ENST00000490689 RHOFQ9HBH0 211 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 PLEKHJ1Q9NW61 149 aa11.66□□□□□ -0.54
SHOX2-205ENST00000490689 H7C1Q1 480 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 BET1O15155 118 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 BRINP1O60477 761 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 NME1P15531 152 aaKnown RBP11.65□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF77Q15935 545 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 MDGA2Q7Z553 956 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 LMX1AQ8TE12 382 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 OR1E3Q8WZA6 343 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 ENTPD2Q9Y5L3 495 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 SLC22A7Q9Y694 548 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 A0A0B4J2E0 115 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms