RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TSEN54Q7Z6J9 526 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 DEFB107AQ8IZN7 70 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 RNF148Q8N7C7 305 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 CLDN22Q8N7P3 220 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 CPEB3Q8NE35 698 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 MCUR1Q96AQ8 359 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 POM121L2Q96KW2 1035 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 C7orf34Q96L11 122 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 GPX7Q96SL4 187 aaPredicted RBP11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 BTBD10Q9BSF8 475 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 ZNF416Q9BWM5 594 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 OR2H1Q9GZK4 316 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 NDRG4Q9ULP0 352 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 ADAM18Q9Y3Q7 739 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 TIMM10BQ9Y5J6 103 aa11.83□□□□□ -0.52
SPTLC1-207ENST00000488921 PRSS37A4D1T9 235 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 LRP5LA4QPB2 252 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 C17orf100A8MU93 164 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 H7C1C5 153 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 LILRA1O75019 489 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 CLPTM1O96005 669 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 TGFAP01135 160 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 IGHV3-13P01766 116 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 HPXP02790 462 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 IGFBP5P24593 272 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 GPR6P46095 362 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 LIMS1P48059 325 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 ERVS71-1P61550 626 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 LCN6P62502 163 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 TEKQ02763 1124 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 SCRN3Q0VDG4 424 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 KRR1Q13601 381 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 ZSCAN26Q16670 478 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 ZNF718Q3SXZ3 478 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 SPATS1Q496A3 300 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 MESTQ5EB52 335 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 FAM122BQ7Z309 247 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 ADCK1Q86TW2 530 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 AKR7LQ8NHP1 331 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 PYURFQ96I23 114 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 RSRC1Q96IZ7 334 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 DHRS1Q96LJ7 313 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 Q96M85 177 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 NSMCE2Q96MF7 247 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 SNX18Q96RF0 628 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 ELOVL3Q9HB03 270 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 HINT3Q9NQE9 182 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 POLE4Q9NR33 117 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 NKIRAS2Q9NYR9 191 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 TAS2R1Q9NYW7 299 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 CGGBP1Q9UFW8 167 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 SIGLEC7Q9Y286 467 aa11.82□□□□□ -0.52
SPTLC1-207ENST00000488921 TANC2Q9HCD6 1990 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 TEX13CA0A0J9YWL9 993 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 LYNX1G3V0Z9 82 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 RRP9O43818 475 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 ICMTO60725 284 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 GADD45GO95257 159 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 LYNX1P0DP58 116 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 COX5BP10606 129 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 PCMT1P22061 227 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 OMPP47874 163 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 RPS6KA3P51812 740 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 ARHGDIAP52565 204 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 TMEM33P57088 247 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 SPIBQ01892 262 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 ENDOGQ14249 297 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 ALKBH6Q3KRA9 238 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 ARHGAP24Q8N264 748 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 FAM86B1Q8N7N1 296 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 LINC01356Q8N9X3 169 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 CDRT15Q96T59 188 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 WNT5BQ9H1J7 359 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 NRIP3Q9NQ35 241 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 PRPF19Q9UMS4 504 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 V9GYQ6 96 aa11.81□□□□□ -0.52
SPTLC1-207ENST00000488921 LOC100509620A0A075B734 347 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 TRBV4-1A0A0J9YWV2 114 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 PLSCR5A0PG75 271 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 UNC119BA6NIH7 251 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 ARPC2O15144 300 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 DOK2O60496 412 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 PTP4A3O75365 173 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 NCR1O76036 304 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 DIRAS1O95057 198 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 TFP02787 698 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 SEMG1P04279 462 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 FABP3P05413 133 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 ZNF26P17031 533 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 SRD5A1P18405 259 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 IFNGR2P38484 337 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 LIPAP38571 399 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 WNT5AP41221 380 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 MAGEB1P43366 347 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 AQP6Q13520 282 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 TRIP10Q15642 601 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 ZMAT1Q5H9K5 638 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 FAM209AQ5JX71 171 aa11.8□□□□□ -0.52
SPTLC1-207ENST00000488921 FAM120AOSQ5T036 256 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms