RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 MCCC2Q9HCC0 563 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 UBAP1Q9NZ09 502 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 OR1A1Q9P1Q5 309 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 TMED5Q9Y3A6 229 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 AP4S1Q9Y587 144 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 FLVCR1Q9Y5Y0 555 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 PAPPA2Q9BXP8 1791 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 PLXNB2O15031 1838 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 CNTNAP1P78357 1384 aa3.6□□□□□ -1.83
SRRM1-215ENST00000488317 COL4A4P53420 1690 aaPredicted RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TNS1Q9HBL0 1735 aaKnown RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 MYO16Q9Y6X6 1858 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 IGKV6D-21A0A0A0MT36 114 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 FAM240BA0A1B0GVZ2 78 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TCRBV3S1A0A5B6 114 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 HEATR9A2RTY3 570 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 VSTM2BA6NLU5 285 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 BBIP1A8MTZ0 92 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 M0QYV0 167 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TIMM8AO60220 97 aaPredicted RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TSC22D2O75157 780 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 LYPLA1O75608 230 aaPredicted RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 STAMBPO95630 424 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 AP2A1O95782 977 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 MCF2P10911 925 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 SDC4P31431 198 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 LEPP41159 167 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 RPL14P50914 215 aaKnown RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 ATP1B3P54709 279 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 ATP5IP56385 69 aaPredicted RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 SEC61GP60059 68 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 RPL23AP62750 156 aaKnown RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 MRPS22P82650 360 aaKnown RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 CHRNB3Q05901 458 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 ART3Q13508 389 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 PSMD5Q16401 504 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 ZBED5Q49AG3 693 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 DMRTC1Q5HYR2 192 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 METTL11BQ5VVY1 283 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 PRMT9Q6P2P2 845 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 ZYG11AQ6WRX3 759 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 LINC00299Q6ZSB3 139 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 ZCCHC23Q6ZST2 131 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 SMIM5Q71RC9 77 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 SLC22A9Q8IVM8 553 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 C10orf107Q8IVU9 208 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 ZBTB8OSQ8IWT0 167 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 CDH26Q8IXH8 852 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 SLC39A11Q8N1S5 342 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 PQLC3Q8N755 202 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TRIML2Q8N7C3 387 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 C10orf35Q96D05 121 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 RCN3Q96D15 328 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 CERS2Q96G23 380 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TPD52L3Q96J77 140 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 DNAJC1Q96KC8 554 aaKnown RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 CNBD2Q96M20 576 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TSNARE1Q96NA8 513 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TAAR1Q96RJ0 339 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 CLCC1Q96S66 551 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 RBBP8Q99708 897 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 TDRD3Q9H7E2 651 aaKnown RBP3.59□□□□□ -1.83
SRRM1-215ENST00000488317 EFCAB1Q9HAE3 211 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 NUDT15Q9NV35 164 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 RHBDL2Q9NX52 303 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 DCAF16Q9NXF7 216 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 GIN1Q9NXP7 522 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 SUN2Q9UH99 717 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 GNPTGQ9UJJ9 305 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 COPS3Q9UNS2 423 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 OTOFQ9HC10 1997 aa3.59□□□□□ -1.83
SRRM1-215ENST00000488317 NYNRINQ9P2P1 1898 aaKnown RBP3.58□□□□□ -1.84
SRRM1-215ENST00000488317 CHD5Q8TDI0 1954 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 IGLV8-61A0A075B6I0 122 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 BTBD17A6NE02 478 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 SNTNA6NMZ2 147 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 TRDCB7Z8K6 153 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 K7ENP7 123 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 WWP2O00308 870 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 CXCL13O43927 109 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 UGT1A9O60656 530 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 KLHL41O60662 606 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 E2F6O75461 281 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 PIAS1O75925 651 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 VAPBO95292 243 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 STSP08842 583 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 OR8U8P0C7N1 319 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 DCKP27707 260 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 CD151P48509 253 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 DNAJB13P59910 316 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 BNIP2Q12982 314 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 STX5Q13190 355 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 ZNF829Q3KNS6 432 aaPredicted RBP3.58□□□□□ -1.84
SRRM1-215ENST00000488317 SAMD4BQ5PRF9 694 aaKnown RBP3.58□□□□□ -1.84
SRRM1-215ENST00000488317 C6orf52Q5T4I8 152 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 FAM45BPQ6NSW5 357 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 NIPAL1Q6NVV3 410 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 SCARA5Q6ZMJ2 495 aa3.58□□□□□ -1.84
SRRM1-215ENST00000488317 FAM183BPQ6ZVS7 135 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms