RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 AP3S1Q92572 193 aa12.96□□□□□ -0.33
POLR2J3-204ENST00000486319 OR8B4Q96RC9 309 aa12.96□□□□□ -0.33
POLR2J3-204ENST00000486319 SF3B5Q9BWJ5 86 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-204ENST00000486319 TTTY12Q9BZ98 90 aa12.96□□□□□ -0.33
POLR2J3-204ENST00000486319 BARHL1Q9BZE3 327 aa12.96□□□□□ -0.33
POLR2J3-204ENST00000486319 TPK1Q9H3S4 243 aa12.96□□□□□ -0.33
POLR2J3-204ENST00000486319 IQCMA0A1B0GVH7 501 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 PRR32B1ATL7 298 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 PSMD9O00233 223 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 TMCC2O75069 709 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 UPK3AO75631 287 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 GATBO75879 557 aaKnown RBP12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 ABHD16AO95870 558 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 EDN3P14138 238 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 ENPP1P22413 925 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 PSMB10P40306 273 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 RPS27P42677 84 aaKnown RBP12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 PLGLB1Q02325 96 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 HIST3H3Q16695 136 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 PCK2Q16822 640 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 HYAL4Q2M3T9 481 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 ZNF324BQ6AW86 544 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 TRILQ7L0X0 811 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 CEACAM19Q7Z692 300 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 WDFY1Q8IWB7 410 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 ST6GALNAC3Q8NDV1 305 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 OR2V1Q8NHB1 315 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 FOXN4Q96NZ1 517 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 KCNS3Q9BQ31 491 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 SLX1AQ9BQ83 275 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 MROQ9BYG7 248 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 TIGARQ9NQ88 270 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 QPCTLQ9NXS2 382 aa12.95□□□□□ -0.34
POLR2J3-204ENST00000486319 BMP4P12644 408 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 MYL9P24844 172 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 LAP3P28838 519 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 CLDN17P56750 224 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 CLDN20P56880 219 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 PMP22Q01453 160 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 ROM1Q03395 351 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 HNRNPA0Q13151 305 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 ALKBH1Q13686 389 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 EIF2B1Q14232 305 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 INSL4Q14641 139 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 SLC17A1Q14916 467 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 ACSM3Q53FZ2 586 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 YIF1BQ5BJH7 314 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 C16orf87Q6PH81 154 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 TPRA1Q86W33 373 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 ZNF679Q8IYX0 411 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 OR10H5Q8NGA6 315 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 OR9K2Q8NGE7 335 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 PHYHIPQ92561 330 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 NSMAFQ92636 917 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 ADGRG7Q96K78 797 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 SRXN1Q9BYN0 137 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 SMURF1Q9HCE7 757 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 ZNF281Q9Y2X9 895 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 SHANK1Q9Y566 2161 aa12.94□□□□□ -0.34
POLR2J3-204ENST00000486319 IGKV1D-43A0A0B4J1Z2 117 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 SMAD9O15198 467 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 ARL6IP5O75915 188 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 GLSO94925 669 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 RPP14O95059 124 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 CLEC2LP0C7M8 214 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 PSKH1P11801 424 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 KLK2P20151 261 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 CFL1P23528 166 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 MEOX1P50221 254 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 ZNF45Q02386 682 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 MEP1BQ16820 701 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 ZNF544Q6NX49 715 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 SLC25A47Q6Q0C1 308 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 KRT77Q7Z794 578 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 UBQLNLQ8IYU4 475 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 MFSD4AQ8N468 514 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 OR52N5Q8NH56 324 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 MCHR2Q969V1 340 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 CPNE4Q96A23 557 aaPredicted RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 INTS12Q96CB8 462 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 UCN2Q96RP3 112 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 ABHD6Q9BV23 337 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 ELOVL3Q9HB03 270 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 SLCO1C1Q9NYB5 712 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 COL12A1Q99715 3063 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 IGHV3-15A0A0B4J1V0 119 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 J3QRK9 145 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 ZNF254O75437 659 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 MPZL1O95297 269 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 CD40LGP29965 261 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 EIF1AXP47813 144 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 CSNK1A1P48729 337 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 STARP49675 285 aa12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 SUCLG1P53597 346 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 NANOS3P60323 173 aaKnown RBP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 SRSF1Q07955 248 aaKnown RBP eCLIP12.93□□□□□ -0.34
POLR2J3-204ENST00000486319 ZMAT1Q5H9K5 638 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms