RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 POLE4Q9NR33 117 aa10.78□□□□□ -0.68
HMG20B-211ENST00000486028 IL20Q9NYY1 176 aa10.78□□□□□ -0.68
HMG20B-211ENST00000486028 SCOCQ9UIL1 159 aa10.78□□□□□ -0.68
HMG20B-211ENST00000486028 TIMM10BQ9Y5J6 103 aa10.78□□□□□ -0.68
HMG20B-211ENST00000486028 F8P00451 2351 aa10.78□□□□□ -0.68
HMG20B-211ENST00000486028 ARRDC5A6NEK1 342 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 DEAF1O75398 565 aaPredicted RBP10.77□□□□□ -0.69
HMG20B-211ENST00000486028 OR4A8P0C604 315 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 HIST1H1CP16403 213 aaKnown RBP10.77□□□□□ -0.69
HMG20B-211ENST00000486028 CTLA4P16410 223 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 THBS4P35443 961 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 ARHGDIAP52565 204 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 GALK2Q01415 458 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 ETFDHQ16134 617 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 TBC1D28Q2M2D7 210 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 PABPC1L2AQ5JQF8 200 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 SLC35F1Q5T1Q4 408 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 C11orf71Q6IPW1 123 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 LEG1Q6P5S2 330 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 CD300LDQ6UXZ3 194 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 SYT9Q86SS6 491 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 LURAP1LQ8IV03 231 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 ZNF584Q8IVC4 421 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 ALDH16A1Q8IZ83 802 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 OR52E2Q8NGJ4 325 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 OR4K13Q8NH42 304 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 SLCO4A1Q96BD0 722 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 SNX18Q96RF0 628 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 NUAK2Q9H093 628 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 ZNF442Q9H7R0 627 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 ZNF556Q9HAH1 456 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 CDH20Q9HBT6 801 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 TBC1D23Q9NUY8 699 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 PDP1Q9P0J1 537 aaPredicted RBP10.77□□□□□ -0.69
HMG20B-211ENST00000486028 BAIAP2Q9UQB8 552 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 PMF1-BGLAPU3KQ54 211 aa10.77□□□□□ -0.69
HMG20B-211ENST00000486028 ZNF32P17041 273 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 APLNRP35414 380 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 CDKN1AP38936 164 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 CENPAP49450 140 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 PSG4Q00888 419 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 SNTB2Q13425 540 aaKnown RBP10.76□□□□□ -0.69
HMG20B-211ENST00000486028 ENDOGQ14249 297 aaKnown RBP10.76□□□□□ -0.69
HMG20B-211ENST00000486028 ADIPOQQ15848 244 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 MST1LQ2TV78 715 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 Q5PR19 223 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 KRT80Q6KB66 452 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 TMEM179BQ7Z7N9 219 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 WFDC11Q8NEX6 87 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 NMNAT3Q96T66 252 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 ZNF416Q9BWM5 594 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 TSSK6Q9BXA6 273 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 CACNG6Q9BXT2 260 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 BARX1Q9HBU1 254 aaPredicted RBP10.76□□□□□ -0.69
HMG20B-211ENST00000486028 SRA1Q9HD15 236 aaKnown RBP10.76□□□□□ -0.69
HMG20B-211ENST00000486028 EMC7Q9NPA0 242 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 FBXO9Q9UK97 447 aaPredicted RBP10.76□□□□□ -0.69
HMG20B-211ENST00000486028 B9D1Q9UPM9 204 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 COA3Q9Y2R0 106 aaPredicted RBP10.76□□□□□ -0.69
HMG20B-211ENST00000486028 CMAHPQ9Y471 501 aa10.76□□□□□ -0.69
HMG20B-211ENST00000486028 RTTNQ86VV8 2226 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 B9A039 149 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 BHLHE40O14503 412 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 TIPRLO75663 272 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 SOX14O95416 240 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 SCG5P05408 212 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 ANXA8P13928 327 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 CD99P14209 185 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 STOMP27105 288 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 APEX1P27695 318 aaKnown RBP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 GLRXP35754 106 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 GDI2P50395 445 aaKnown RBP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 RPS23P62266 143 aaKnown RBP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 LSM6P62312 80 aaKnown RBP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 SNRPD2P62316 118 aaKnown RBP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 CCNIQ14094 377 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 RAB35Q15286 201 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 EFNB3Q15768 340 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 KCNMB1Q16558 191 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 SHQ1Q6PI26 577 aaKnown RBP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 UGT2A3Q6UWM9 527 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 KRTAP1-3Q8IUG1 177 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 OR6V1Q8N148 313 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 LNX2Q8N448 690 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 NPEPL1Q8NDH3 523 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 CPEB3Q8NE35 698 aaKnown RBP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 OR2T33Q8NG76 320 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 OR8D4Q8NGM9 314 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 AKR7LQ8NHP1 331 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 NRBF2Q96F24 287 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 FOXN4Q96NZ1 517 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 TSSK2Q96PF2 358 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 NIPSNAP1Q9BPW8 284 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 PLA2G12AQ9BZM1 189 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 OR2H1Q9GZK4 316 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 WNT5BQ9H1J7 359 aa10.75□□□□□ -0.69
HMG20B-211ENST00000486028 RPRD1BQ9NQG5 326 aaKnown RBP10.75□□□□□ -0.69
HMG20B-211ENST00000486028 PAPOLBQ9NRJ5 636 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms