RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 PSD4Q8NDX1 1056 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 OR51G2Q8NGK0 314 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 OR10A6Q8NH74 314 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 OR14L1PQ8NHC6 308 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 VANGL1Q8TAA9 524 aaPredicted RBP3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 TM9SF4Q92544 642 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 RORBQ92753 470 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 ABTB1Q969K4 478 aaPredicted RBP3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 MOB3AQ96BX8 217 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 C8orf44Q96CB5 159 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 CMTM7Q96FZ5 175 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 SENP5Q96HI0 755 aaPredicted RBP3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 ITCHQ96J02 903 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 JSRP1Q96MG2 331 aaPredicted RBP3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 VSTM2LQ96N03 204 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 CASD1Q96PB1 797 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 EPYCQ99645 322 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 DDA1Q9BW61 102 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 GABARAPL3Q9BY60 117 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 NXF2Q9GZY0 626 aaKnown RBP3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 PPIL3Q9H2H8 161 aaKnown RBP3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 C1orf198Q9H425 327 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 IKZF5Q9H5V7 419 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 SLA2Q9H6Q3 261 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC28A3Q9HAS3 691 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 RAB9BQ9NP90 201 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 SIRT7Q9NRC8 400 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC2A9Q9NRM0 540 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 THSD1Q9NS62 852 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 ACOXLQ9NUZ1 547 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 NECAP2Q9NVZ3 263 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 PLEKHJ1Q9NW61 149 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 BABAM2Q9NXR7 383 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 P2RX2Q9UBL9 471 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 OPTCQ9UBM4 332 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 STEAP1Q9UHE8 339 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 RNF150Q9ULK6 438 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 MEMO1Q9Y316 297 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 ZNF337Q9Y3M9 751 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 ATG4BQ9Y4P1 393 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 YIPF1Q9Y548 306 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 ORC6Q9Y5N6 252 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 CROCCQ5TZA2 2017 aa3.6□□□□□ -1.83
PRPF38B-205ENST00000485810 KIAA1671Q9BY89 1806 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 KBTBD11-OT1A0A1B0GTJ5 212 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 FAM90A10PA6NDY2 464 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 OR5K3A6NET4 321 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 PRR23AA6NEV1 266 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 FRG2CA6NGY1 282 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 RFPL4AA6NLU0 287 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 LOC730098B7Z3J9 87 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 NPIPB11E5RHQ5 1161 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 RFPL4AL1F8VTS6 287 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 GNGT2O14610 69 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 NUPL2O15504 423 aaKnown RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC25A14O95258 325 aaPredicted RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 BRI3O95415 125 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 IFNA21P01568 189 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 C8GP07360 202 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 DCNP07585 359 aaKnown RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 DANCRP0C864 163 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 RNF224P0DH78 156 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 CPN1P15169 458 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 PMCHP20382 165 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 PPIBP23284 216 aaKnown RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 IGFBP5P24593 272 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 GABRA5P31644 462 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 S100A3P33764 101 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 HPCAL1P37235 193 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 OPRL1P41146 370 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 CRYBB2P43320 205 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 CDX1P47902 265 aaPredicted RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 PLP1P60201 277 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 RPS24P62847 133 aaKnown RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 MAD2L1BPQ15013 274 aaPredicted RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 LTB4RQ15722 352 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 EFNB3Q15768 340 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 SYPL1Q16563 259 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 MEP1AQ16819 746 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 ZIK1Q3SY52 487 aaPredicted RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 GCSAMLQ5JQS6 135 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 SPIN3Q5JUX0 258 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC22A10Q63ZE4 541 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 OR4F3Q6IEY1 312 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 OR2T5Q6IEZ7 315 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 FRMPD2BQ6IN97 320 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 CES5AQ6NT32 575 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 RPL13AP3Q6NVV1 102 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 FAM199XQ6PEV8 388 aaPredicted RBP3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 C19orf48Q6RUI8 117 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 SPESP1Q6UW49 350 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 SCIMPQ6UWF3 145 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 NPSR1Q6W5P4 371 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 C3P1Q6ZMU1 363 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 ACOT7LQ6ZUV0 252 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 USP43Q70EL4 1123 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 H2BFWTQ7Z2G1 175 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 TMEM179BQ7Z7N9 219 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 TRAPPC5Q8IUR0 188 aa3.59□□□□□ -1.83
PRPF38B-205ENST00000485810 NAXDQ8IW45 347 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms