RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ETHE1O95571 254 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 KLK1P06870 262 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 GABRR1P24046 479 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 RFC3P40938 356 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 FGF8P55075 233 aaPredicted RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 NUTF2P61970 127 aaKnown RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 MXD1Q05195 221 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 TSC22D1Q15714 1073 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 GABRA6Q16445 453 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 LRRC10Q5BKY1 277 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 LCN12Q6JVE5 192 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 TMEM179Q6ZVK1 233 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 SLC35D2Q76EJ3 337 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 THOC6Q86W42 341 aaKnown RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 RALGPS2Q86X27 583 aaPredicted RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 ARHGAP18Q8N392 663 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 CD177Q8N6Q3 437 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 FAM86B1Q8N7N1 296 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 OR10G9Q8NGN4 311 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 OR2G3Q8NGZ4 309 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 LILRB4Q8NHJ6 448 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 FAM131CQ96AQ9 280 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 EEF1AKMT3Q96AZ1 226 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 ZBED3Q96IU2 234 aaPredicted RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 NRIP2Q9BQI9 281 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 PATZ1Q9HBE1 687 aaKnown RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 KCNJ16Q9NPI9 418 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 CTPS2Q9NRF8 586 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 MTRF1LQ9UGC7 380 aaKnown RBP3.26□□□□□ -1.89
VPS13A-211ENST00000484581 FLVCR2Q9UPI3 526 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 KCNE3Q9Y6H6 103 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 DENND4AQ7Z401 1863 aa3.26□□□□□ -1.89
VPS13A-211ENST00000484581 TNRQ92752 1358 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 MAPK8IP3Q9UPT6 1336 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 A6NDN8 102 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 A8MUA0 341 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 H3BNH8 94 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 PLPP1O14494 284 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 CRLF1O75462 422 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 MMP23AO75900 390 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 UTS2O95399 124 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 IGHV3-43DP0DP04 118 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 RAB4AP20338 218 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 PRKACBP22694 351 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 HRH1P35367 487 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 CSKP41240 450 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 PRPS1P60891 318 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 RCAN2Q14206 197 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 SGCAQ16586 387 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 TPRG1LQ5T0D9 272 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 RNF165Q6ZSG1 346 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 LINC00336Q6ZUF6 198 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 H2AFVQ71UI9 128 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 ST13P4Q8IZP2 240 aaPredicted RBP3.25□□□□□ -1.89
VPS13A-211ENST00000484581 GPD1LQ8N335 351 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 OR4F15Q8NGB8 312 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 OR51F2Q8NH61 342 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 LRRC20Q8TCA0 184 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 FAM151AQ8WW52 585 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 ATP6V1G3Q96LB4 118 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 PLEKHF1Q96S99 279 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 EML4Q9HC35 981 aaKnown RBP3.25□□□□□ -1.89
VPS13A-211ENST00000484581 MRM3Q9HC36 420 aaKnown RBP3.25□□□□□ -1.89
VPS13A-211ENST00000484581 MCUBQ9NWR8 336 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 PLEKHG1Q9ULL1 1385 aa3.25□□□□□ -1.89
VPS13A-211ENST00000484581 A0A0G2JN53 185 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 HIDE1A8MVS5 230 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 HSBP1L1C9JCN9 74 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 FAM189A1O60320 539 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 NMT2O60551 498 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 TDGF1P13385 188 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 CD9P21926 228 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 CCNOP22674 350 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 TDGF1P3P51864 188 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 ATP6V0D1P61421 351 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 TIMM10P62072 90 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 YWHAEP62258 255 aaKnown RBP3.24□□□□□ -1.89
VPS13A-211ENST00000484581 RPS21P63220 83 aaKnown RBP3.24□□□□□ -1.89
VPS13A-211ENST00000484581 COA6Q5JTJ3 125 aaKnown RBP3.24□□□□□ -1.89
VPS13A-211ENST00000484581 CCNJQ5T5M9 372 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 TPTE2P1Q5T6R2 138 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 SPECC1LQ69YQ0 1117 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 ADNP2Q6IQ32 1131 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 C6orf89Q6UWU4 347 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 CBLN2Q8IUK8 224 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 CEND1Q8N111 149 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 TCAIMQ8N3R3 496 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 NDNFQ8TB73 568 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 ITFG1Q8TB96 612 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 TCP10LQ8TDR4 215 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 GEMIN6Q8WXD5 167 aaKnown RBP3.24□□□□□ -1.89
VPS13A-211ENST00000484581 DCUN1D4Q92564 292 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 MARC2Q969Z3 335 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 COL21A1Q96P44 957 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 MICU1Q9BPX6 476 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 GABARAPL3Q9BY60 117 aa3.24□□□□□ -1.89
VPS13A-211ENST00000484581 DMAP1Q9NPF5 467 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms