RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 NAA10P41227 235 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-204ENST00000483941 OR3A2P47893 321 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 ALDH3B2P48448 385 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 PCBD1P61457 104 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 MRPS34P82930 218 aaKnown RBP12.33□□□□□ -0.44
SMAD9-204ENST00000483941 BDH1Q02338 343 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 TGFBR3Q03167 851 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 MED22Q15528 200 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 PCK2Q16822 640 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 SYT6Q5T7P8 510 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-204ENST00000483941 TMEM211Q6ICI0 200 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF544Q6NX49 715 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 RPTNQ6XPR3 784 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 B3GLCTQ6Y288 498 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 FOXL2NBQ6ZUU3 175 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 RHOUQ7L0Q8 258 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 FAM220AQ7Z4H9 259 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 FGD2Q7Z6J4 655 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 CDC20BQ86Y33 519 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 UBE2J2Q8N2K1 259 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 ST6GALNAC3Q8NDV1 305 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 OTOSQ8NHW6 89 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 SGCDQ92629 289 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 MUL1Q969V5 352 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 COG8Q96MW5 612 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 SIAEQ9HAT2 523 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 CRLF2Q9HC73 371 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 GPR35Q9HC97 309 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF835Q9Y2P0 537 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 POLEQ07864 2286 aa12.33□□□□□ -0.44
SMAD9-204ENST00000483941 TVP23AA6NH52 213 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 SELENOFO60613 162 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF254O75437 659 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 UPK3AO75631 287 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 APOL3O95236 402 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 KRT8P05787 483 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 SPARCP09486 303 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 LIMS3P0CW19 117 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 LIMS4P0CW20 117 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 GAAP10253 952 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 PSMB9P28065 219 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 MAP2K4P45985 399 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 ETV1P50549 477 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 ROR2Q01974 943 aaKnown RBP12.32□□□□□ -0.44
SMAD9-204ENST00000483941 ACSM1Q08AH1 577 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 ETFDHQ16134 617 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 TIGD6Q17RP2 521 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 FAM27BQ5VT28 67 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 FBXW9Q5XUX1 488 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 XAF1Q6GPH4 301 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 DEGS2Q6QHC5 323 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 ZNF322Q6U7Q0 402 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-204ENST00000483941 DPY19L4Q7Z388 723 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 SYT9Q86SS6 491 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 LHFPL3Q86UP9 236 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 ZNRF4Q8WWF5 429 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 C11orf40Q8WZ69 217 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 MROQ9BYG7 248 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 FAM192AQ9GZU8 254 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 C1orf198Q9H425 327 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 TRIM36Q9NQ86 728 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 POLE4Q9NR33 117 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 BABAM2Q9NXR7 383 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 CLEC4AQ9UMR7 237 aa12.32□□□□□ -0.44
SMAD9-204ENST00000483941 NOL3O60936 208 aaKnown RBP12.31□□□□□ -0.44
SMAD9-204ENST00000483941 PTHP01270 115 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 TFP02787 698 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 TMIGD3P0DMS9 266 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-204ENST00000483941 OR8G3PP0DMU2 310 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 ALOX5APP20292 161 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 MPGP29372 298 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 GBX2P52951 348 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-204ENST00000483941 MLLT11Q13015 90 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-204ENST00000483941 GPR50Q13585 617 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 GUSBP1Q15486 140 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 SGCAQ16586 387 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 TIMM50Q3ZCQ8 353 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 CDONQ4KMG0 1287 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 TSPO2Q5TGU0 170 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 CCDC36Q8IYA8 594 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 CNEP1R1Q8N9A8 125 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 C9orf106Q8NAJ2 232 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 GJC3Q8NFK1 279 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 THEM6Q8WUY1 208 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 TBX5Q99593 518 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 MGLLQ99685 303 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 FOXB1Q99853 325 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 SFXN3Q9BWM7 321 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 MRPL22Q9NWU5 206 aaKnown RBP12.31□□□□□ -0.44
SMAD9-204ENST00000483941 MALT1Q9UDY8 824 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 CLEC2DQ9UHP7 191 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
SMAD9-204ENST00000483941 METTL15A6NJ78 407 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 SEC14L2O76054 403 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 WISP2O76076 250 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 IL18BPO95998 194 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 SCG5P05408 212 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 CST2P09228 141 aa12.3□□□□□ -0.44
SMAD9-204ENST00000483941 HSMCR30P0CW71 290 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms