RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 RAB3DO95716 219 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 RAB5BP61020 215 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 PRICKLE4Q2TBC4 344 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 VWA2Q5GFL6 755 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 ZNF684Q5T5D7 378 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 SMRP1Q8NCR6 262 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 OR5AP2Q8NGF4 316 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 PHOSPHO1Q8TCT1 267 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 TM4SF19Q96DZ7 209 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 FBXO17Q96EF6 278 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 CCDC3Q9BQI4 270 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 UQCC1Q9NVA1 299 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 FAM96BQ9Y3D0 163 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 MPDZO75970 2070 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 ZNF705EA8MWA4 302 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-207ENST00000482722 H7C1C5 153 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 HRKO00198 91 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 AMY2AP04746 511 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 S100A8P05109 93 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 CD79AP11912 226 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 GABRG2P18507 467 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 POU3F4P49335 361 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 LCN6P62502 163 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 SRSF4Q08170 494 aaKnown RBP12.91□□□□□ -0.34
COL9A2-207ENST00000482722 KIR2DS3Q14952 304 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 LEG1Q6P5S2 330 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 C5orf46Q6UWT4 87 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 SKA3Q8IX90 412 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 CCDC74AQ96AQ1 378 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 SEC11CQ9BY50 192 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 SRA1Q9HD15 236 aaKnown RBP12.91□□□□□ -0.34
COL9A2-207ENST00000482722 ACKR4Q9NPB9 350 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 HRASLS2Q9NWW9 162 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 MIOXQ9UGB7 285 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 PILRAQ9UKJ1 303 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 IKZF2Q9UKS7 526 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 CDV3Q9UKY7 258 aaKnown RBP12.91□□□□□ -0.34
COL9A2-207ENST00000482722 HEATR5AQ86XA9 2040 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 ALOX12BO75342 701 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 HLA-AP01891 365 aaKnown RBP12.91□□□□□ -0.34
COL9A2-207ENST00000482722 SMIM10L1P0DMW3 83 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 ACAA2P42765 397 aaKnown RBP12.91□□□□□ -0.34
COL9A2-207ENST00000482722 ALKBH1Q13686 389 aaKnown RBP12.91□□□□□ -0.34
COL9A2-207ENST00000482722 PEA15Q15121 130 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 RNF44Q7L0R7 432 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 OR13H1Q8NG92 308 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 OR9A4Q8NGU2 314 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 SMIM10Q96HG1 83 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 WDR92Q96MX6 357 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 ALG12Q9BV10 488 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 ENTPD2Q9Y5L3 495 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 MTCH2Q9Y6C9 303 aa12.91□□□□□ -0.34
COL9A2-207ENST00000482722 TRBV5-5A0A0J9YX44 114 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 C5orf52A6NGY3 159 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 GMFGO60234 142 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 UPK3AO75631 287 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 GPANK1O95872 356 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 MELTFP08582 738 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 PPM1FP49593 454 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-207ENST00000482722 PGDP52209 483 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 ERV3-1Q14264 604 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 RBM39Q14498 530 aaKnown RBP12.9□□□□□ -0.34
COL9A2-207ENST00000482722 SMCO1Q147U7 214 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 PRAMEF17Q5VTA0 474 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 Q6ZSR6 202 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 MISPQ8IVT2 679 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 CSNK1A1LQ8N752 337 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 GATSQ8NAP1 163 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 INO80EQ8NBZ0 244 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-207ENST00000482722 GPX8Q8TED1 209 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 EDARADDQ8WWZ3 215 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 TMEM106AQ96A25 262 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 ADAD1Q96M93 576 aaKnown RBP12.9□□□□□ -0.34
COL9A2-207ENST00000482722 POTEKPQ9BYX7 375 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 ZMAT3Q9HA38 289 aaKnown RBP12.9□□□□□ -0.34
COL9A2-207ENST00000482722 MRM2Q9UI43 246 aaKnown RBP12.9□□□□□ -0.34
COL9A2-207ENST00000482722 ZDBF2Q9HCK1 2354 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 CSN2P05814 226 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 CDKN2AP42771 156 aaKnown RBP12.9□□□□□ -0.34
COL9A2-207ENST00000482722 TAS2R19P59542 299 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 NFATC4Q14934 902 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 TMED6Q8WW62 240 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 ZBTB8AQ96BR9 441 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 PIK3IP1Q96FE7 263 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 RXFP3Q9NSD7 469 aa12.9□□□□□ -0.34
COL9A2-207ENST00000482722 LOC100509620A0A075B734 347 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 DCTN6O00399 190 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 CYR61O00622 381 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 IGKV1D-16P01601 117 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 PRKXP51817 358 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 GFOD2Q3B7J2 385 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 SCGB2B2Q4G0G5 96 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 ARHGAP40Q5TG30 622 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 TMEM205Q6UW68 189 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 NAA40Q86UY6 237 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 C10orf53Q8N6V4 93 aa12.89□□□□□ -0.35
COL9A2-207ENST00000482722 SLC25A21Q9BQT8 299 aaPredicted RBP12.89□□□□□ -0.35
COL9A2-207ENST00000482722 ATG5Q9H1Y0 275 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms