RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 IGKV1D-43A0A0B4J1Z2 117 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 IRGMA1A4Y4 181 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 ZNF726A6NNF4 738 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 J3QRE1 110 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 GPR171O14626 319 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 SLC16A7O60669 478 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 RAB36O95755 333 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 TGM6O95932 706 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 TFP02787 698 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 STSP08842 583 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 GAAP10253 952 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 SFTPCP11686 197 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 NR2C1P13056 603 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 ATP6V1B1P15313 513 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 CRABP1P29762 137 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 PTGS2P35354 604 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 CSNK1A1P48729 337 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 SELENOPP49908 381 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 ZNF133P52736 654 aaPredicted RBP5.87□□□□□ -1.47
USP48-208ENST00000479177 CLRN1P58418 232 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 RPS7P62081 194 aaKnown RBP5.87□□□□□ -1.47
USP48-208ENST00000479177 TUBA4AP68366 448 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 ST3GAL4Q11206 333 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 RAB40BQ12829 278 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 CAMK2DQ13557 499 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 BLMHQ13867 455 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 IRF3Q14653 427 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 RNPS1Q15287 305 aaKnown RBP5.87□□□□□ -1.47
USP48-208ENST00000479177 GUSBP1Q15486 140 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 TBCEQ15813 527 aaPredicted RBP5.87□□□□□ -1.47
USP48-208ENST00000479177 HIST3H3Q16695 136 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 CARD17Q5XLA6 110 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 NSUN5P2Q63ZY6 315 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 TMEM154Q6P9G4 183 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 DNM1P34Q6PK57 102 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 SLC25A47Q6Q0C1 308 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 B3GLCTQ6Y288 498 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 CHMP1BQ7LBR1 199 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 SHFQ7M4L6 423 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 C20orf196Q8IYI0 205 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 SPARTQ8N0X7 666 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 OR6V1Q8N148 313 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 STX19Q8N4C7 294 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 POMGNT2Q8NAT1 580 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 SYT14Q8NB59 555 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 OR4F15Q8NGB8 312 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 OR51L1Q8NGJ5 315 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 OR51G2Q8NGK0 314 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 OR52I1Q8NGK6 324 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 OR5M9Q8NGP3 310 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 OR6K6Q8NGW6 343 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 FAM57AQ8TBR7 257 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 TMEM54Q969K7 222 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 ZMYND19Q96E35 227 aaPredicted RBP5.87□□□□□ -1.47
USP48-208ENST00000479177 CNN2Q99439 309 aaKnown RBP5.87□□□□□ -1.47
USP48-208ENST00000479177 TEAD3Q99594 435 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 PRRG4Q9BZD6 226 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 NUAK2Q9H093 628 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 MARCH7Q9H992 704 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 BCO1Q9HAY6 547 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 ADGRL4Q9HBW9 690 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 ASF1BQ9NVP2 202 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 TAS2R16Q9NYV7 291 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 SCOCQ9UIL1 159 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 B9D1Q9UPM9 204 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 MOKQ9UQ07 419 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 EXOGQ9Y2C4 368 aaKnown RBP5.87□□□□□ -1.47
USP48-208ENST00000479177 COMMD3-BMI1R4GMX3 469 aa5.87□□□□□ -1.47
USP48-208ENST00000479177 FLNCQ14315 2725 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 ANKHD1Q8IWZ3 2542 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 PHF3Q92576 2039 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 TVP23AA6NH52 213 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 CD8B2A6NJW9 211 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 FAM171A2A8MVW0 826 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 AHRRA9YTQ3 701 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 SELENOFO60613 162 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 SS18L1O75177 396 aaPredicted RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 SLC43A1O75387 559 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 KHDRBS3O75525 346 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 FADS2O95864 444 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 GPANK1O95872 356 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 CLPTM1O96005 669 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 TPOP07202 933 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 MRPL3P09001 348 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 SBK2P0C263 348 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 LIMS3P0CW19 117 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 LIMS4P0CW20 117 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 PSKH1P11801 424 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 PCMT1P22061 227 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 EDNRAP25101 427 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 DCKP27707 260 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 C21orf33P30042 268 aaPredicted RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 AGTR1P30556 359 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 PTGER4P35408 488 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 NAA10P41227 235 aaPredicted RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 MAP2K4P45985 399 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 CENPAP49450 140 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 LY6DQ14210 128 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 ETFDHQ16134 617 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 KLHL22Q53GT1 634 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms