RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 ZNF770Q6IQ21 691 aaPredicted RBP17.52■□□□□ 0.4
TRIM8-203ENST00000479004 PGBD2Q6P3X8 592 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 MEX3DQ86XN8 651 aaKnown RBP17.52■□□□□ 0.4
TRIM8-203ENST00000479004 OR10G2Q8NGC3 310 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 OR9Q2Q8NGE9 314 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 LRTOMTQ8WZ04 291 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 MSI2Q96DH6 328 aaKnown RBP17.52■□□□□ 0.4
TRIM8-203ENST00000479004 NDEL1Q9GZM8 345 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 SIAEQ9HAT2 523 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 SMURF2Q9HAU4 748 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 NTN4Q9HB63 628 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 MYEF2Q9P2K5 600 aaKnown RBP17.52■□□□□ 0.4
TRIM8-203ENST00000479004 ZNF346Q9UL40 294 aaKnown RBP17.52■□□□□ 0.4
TRIM8-203ENST00000479004 UGT2A1Q9Y4X1 527 aa17.52■□□□□ 0.4
TRIM8-203ENST00000479004 RTTNQ86VV8 2226 aa17.52■□□□□ 0.39
TRIM8-203ENST00000479004 IGKV1D-43A0A0B4J1Z2 117 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 UNC119BA6NIH7 251 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 CDC42EP2O14613 210 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 PTHP01270 115 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 IGHMP01871 453 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 TACSTD2P09758 323 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 FAM157CP0CG43 387 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 CCL2P13500 99 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 ALDH3B1P43353 468 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 GSSP48637 474 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 MRPS34P82930 218 aaKnown RBP17.51■□□□□ 0.39
TRIM8-203ENST00000479004 TSPAN31Q12999 210 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 RIN1Q13671 783 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 ZBED5Q49AG3 693 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 SHQ1Q6PI26 577 aaKnown RBP17.51■□□□□ 0.39
TRIM8-203ENST00000479004 SLC25A47Q6Q0C1 308 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 CXXC5Q7LFL8 322 aaKnown RBP17.51■□□□□ 0.39
TRIM8-203ENST00000479004 TMEM179BQ7Z7N9 219 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 LRRC18Q8N456 261 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 LRRC75AQ8NAA5 344 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 OR13C2Q8NGS9 318 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 OR51A7Q8NH64 312 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 OR5K1Q8NHB7 308 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 NABP1Q96AH0 204 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 CENPNQ96H22 339 aaPredicted RBP17.51■□□□□ 0.39
TRIM8-203ENST00000479004 BEX2Q9BXY8 128 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 CDH20Q9HBT6 801 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 PDP1Q9P0J1 537 aaPredicted RBP17.51■□□□□ 0.39
TRIM8-203ENST00000479004 LPAR3Q9UBY5 353 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 DUSP13Q9UII6 198 aa17.51■□□□□ 0.39
TRIM8-203ENST00000479004 LOC100289279A0A1B0GTE1 492 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 IQCMA0A1B0GVH7 501 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 LILRA1O75019 489 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 SNAP29O95721 258 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 FAM157BP0CG42 384 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 CDAP32320 146 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 RPL27P61353 136 aaKnown RBP17.5■□□□□ 0.39
TRIM8-203ENST00000479004 PLP2Q04941 152 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 FMODQ06828 376 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 CD47Q08722 323 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 TOP3AQ13472 1001 aaPredicted RBP17.5■□□□□ 0.39
TRIM8-203ENST00000479004 FHL1Q13642 323 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 MAD2L1BPQ15013 274 aaPredicted RBP17.5■□□□□ 0.39
TRIM8-203ENST00000479004 TBC1D28Q2M2D7 210 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 ELFN2Q5R3F8 820 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 FAM166AQ6J272 317 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 RGS7BPQ6MZT1 257 aaPredicted RBP17.5■□□□□ 0.39
TRIM8-203ENST00000479004 AMIGO2Q86SJ2 522 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 ARIH2OSQ8N7S6 290 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 AQP11Q8NBQ7 271 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 OR1J2Q8NGS2 313 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 NSMAFQ92636 917 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 ALG12Q9BV10 488 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 DGCR6LQ9BY27 220 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 KCNS2Q9ULS6 477 aa17.5■□□□□ 0.39
TRIM8-203ENST00000479004 TRAV27A0A087WT01 109 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 LRP5LA4QPB2 252 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 LYNX1G3V0Z9 82 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 PTP4A3O75365 173 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 GASTP01350 101 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 LYNX1P0DP58 116 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 NR2C1P13056 603 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 GSTM3P21266 225 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 IGFBP5P24593 272 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 CHN2P52757 468 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 CTXN1P60606 82 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 IGFN1Q86VF2 1251 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 CPEB3Q8NE35 698 aaKnown RBP17.49■□□□□ 0.39
TRIM8-203ENST00000479004 GPA33Q99795 319 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 PKP2Q99959 881 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 SOX7Q9BT81 388 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 SHARPINQ9H0F6 387 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 KCNN2Q9H2S1 579 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 SIGLEC7Q9Y286 467 aa17.49■□□□□ 0.39
TRIM8-203ENST00000479004 A0A1W2PPW3 197 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 HPXP02790 462 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 ANXA8P13928 327 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 ZNF250P15622 560 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 RAD52P43351 418 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 UCP2P55851 309 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 PABPC1L2AQ5JQF8 200 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 THEM4Q5T1C6 240 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 ZDHHC13Q8IUH4 622 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 ZNF519Q8TB69 540 aa17.48■□□□□ 0.39
TRIM8-203ENST00000479004 FNDC8Q8TC99 324 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms