RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CMTM4Q8IZR5 234 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 METTL27Q8N6F8 245 aaPredicted RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 FRMD1Q8N878 549 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 DTX3Q8N9I9 347 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 GATSQ8NAP1 163 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 OR4D9Q8NGE8 314 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 OR56B4Q8NH76 319 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 OR5AK2Q8NH90 309 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 ZPLD1Q8TCW7 415 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 PTPMT1Q8WUK0 201 aaPredicted RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 ZNRF4Q8WWF5 429 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 DEDD2Q8WXF8 326 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 NSMAFQ92636 917 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 HGDQ93099 445 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 PHF21AQ96BD5 680 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 S100A16Q96FQ6 103 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 KLHL15Q96M94 604 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 ZFP3Q96NJ6 502 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TGM7Q96PF1 710 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 LPAR4Q99677 370 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 PDCD1LG2Q9BQ51 273 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 SPRTNQ9H040 489 aaPredicted RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 COMMD4Q9H0A8 199 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 NXF5Q9H1B4 397 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 CDIP1Q9H305 208 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 WDR76Q9H967 626 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TCF7L1Q9HCS4 588 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 DIABLOQ9NR28 239 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 PNO1Q9NRX1 252 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 CUTCQ9NTM9 273 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 NUDT15Q9NV35 164 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 C2orf42Q9NWW7 574 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 UCKL1Q9NWZ5 548 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 KLHL9Q9P2J3 617 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 GRHPRQ9UBQ7 328 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 WNT16Q9UBV4 365 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 MRM2Q9UI43 246 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 LAMP5Q9UJQ1 280 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 MRPS7Q9Y2R9 242 aaKnown RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 TMEM184BQ9Y519 407 aaPredicted RBP4.45□□□□□ -1.7
SF3B6-202ENST00000478050 KIF26BQ2KJY2 2108 aa4.45□□□□□ -1.7
SF3B6-202ENST00000478050 URB1O60287 2271 aaKnown RBP4.44□□□□□ -1.7
SF3B6-202ENST00000478050 APC2O95996 2303 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 SPAG17Q6Q759 2223 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 UNC13CQ8NB66 2214 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 MEIKINA0A087WXM9 373 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 TRBV5-7A0A0A0MS05 114 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 A0A0B4J203 849 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 IGHV5-51A0A0C4DH38 117 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 A0A1B0GUH1 482 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 A0A1B0GVC2 190 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 TMEM72A0PK05 275 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 A6NIN4 97 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 ACOD1A6NK06 481 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 A6NL46 340 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 TMEM212A6NML5 194 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 OR4C45A6NMZ5 311 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 RHPN2P1A8MT19 583 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 A8MUA0 341 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 LMO7DNF2Z398 122 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 ACOT7O00154 380 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF593O00488 134 aaPredicted RBP4.44□□□□□ -1.7
SF3B6-202ENST00000478050 XKRYO14609 159 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 FABP7O15540 132 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 TSPAN2O60636 221 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 ICOSLGO75144 302 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF254O75437 659 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 KHDRBS3O75525 346 aaKnown RBP4.44□□□□□ -1.7
SF3B6-202ENST00000478050 SLC25A12O75746 678 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 SERPINI2O75830 405 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 SNAPC5O75971 98 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 ZFPL1O95159 310 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 DDAH2O95865 285 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 TGM6O95932 706 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 MT-ATP6P00846 226 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 IGHMP01871 453 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 BGLAPP02818 100 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 WNT1P04628 370 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 FREM3P0C091 2139 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 SULT1A3P0DMM9 295 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 SULT1A4P0DMN0 295 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 OR8G3PP0DMU2 310 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 GP1BBP13224 206 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 FBLP22087 321 aaKnown RBP4.44□□□□□ -1.7
SF3B6-202ENST00000478050 CXCR1P25024 350 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 TACR3P29371 465 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 HTR2BP41595 481 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 SRP9P49458 86 aaKnown RBP4.44□□□□□ -1.7
SF3B6-202ENST00000478050 CCR9P51686 369 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 ART1P52961 327 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 PNLIPRP2P54317 469 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 NANOS3P60323 173 aaKnown RBP4.44□□□□□ -1.7
SF3B6-202ENST00000478050 GALK2Q01415 458 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF117Q03924 483 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 EGR4Q05215 589 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 LTBQ06643 244 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 RASGEF1BQ0VAM2 473 aa4.44□□□□□ -1.7
SF3B6-202ENST00000478050 DBPQ10586 325 aaPredicted RBP4.44□□□□□ -1.7
SF3B6-202ENST00000478050 SRSF5Q13243 272 aaKnown RBP4.44□□□□□ -1.7
SF3B6-202ENST00000478050 CBFBQ13951 182 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms