RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 NCBP2LA6PVI3 153 aaKnown RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 HDAC3O15379 428 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 EMC8O43402 210 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 KDELR3O43731 214 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 LSM8O95777 96 aaKnown RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 CD1EP15812 388 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 CSNK2A2P19784 350 aaPredicted RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 PTNP21246 168 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 AK4P27144 223 aaPredicted RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 NUP62P37198 522 aaPredicted RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 RFC3P40938 356 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 SERPINB8P50452 374 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 HADHBP55084 474 aaKnown RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 ATP6V0D1P61421 351 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 TIMM10P62072 90 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 PON3Q15166 354 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 TSC22D1Q15714 1073 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 ZNF239Q16600 458 aaKnown RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 ZNF829Q3KNS6 432 aaPredicted RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 ZBED5Q49AG3 693 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 SPINK14Q6IE38 97 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 ZNF621Q6ZSS3 439 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 COX15Q7KZN9 410 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 STPG2Q8N412 459 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 TRAM1L1Q8N609 369 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 FAM86B1Q8N7N1 296 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 OR2A1Q8NGT9 310 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 OR51F2Q8NH61 342 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 FOXC2Q99958 501 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 NAA50Q9GZZ1 169 aaKnown RBP3.82□□□□□ -1.8
SDHB-205ENST00000475506 KPTNQ9Y664 436 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 GTF3C1Q12789 2109 aa3.82□□□□□ -1.8
SDHB-205ENST00000475506 WDR62O43379 1518 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 ADGRA3Q8IWK6 1321 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 NDUFS8O00217 210 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 PES1O00541 588 aaKnown RBP3.81□□□□□ -1.8
SDHB-205ENST00000475506 PEX7O00628 323 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 FARS2O95363 451 aaKnown RBP3.81□□□□□ -1.8
SDHB-205ENST00000475506 ARG1P05089 322 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 GNAO1P09471 354 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 HPGDP15428 266 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 PMCHP20382 165 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 GABRR2P28476 465 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 CASQ1P31415 396 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 MAS1LP35410 378 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 LONP1P36776 959 aaKnown RBP3.81□□□□□ -1.8
SDHB-205ENST00000475506 GPR1P46091 355 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 PSMD4P55036 377 aaKnown RBP3.81□□□□□ -1.8
SDHB-205ENST00000475506 ZNF33AQ06730 810 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 CDH17Q12864 832 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 UNC119Q13432 240 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 SLC1A5Q15758 541 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 RNF212Q495C1 297 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 ANKRD22Q5VYY1 191 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 OTPQ5XKR4 325 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 SLC25A25Q6KCM7 469 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 C12orf54Q6X4T0 127 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 LINC00336Q6ZUF6 198 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 TMEM179Q6ZVK1 233 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 PEX26Q7Z412 305 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 MYOCDQ8IZQ8 938 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 ARRDC1Q8N5I2 433 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 FBXO36Q8NEA4 188 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 OR10J6PQ8NGY7 276 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 LINC01006Q8NI28 216 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 RDH5Q92781 318 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 ISOC2Q96AB3 205 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 TMIGD2Q96BF3 282 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 FAM3DQ96BQ1 224 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 DNAJC19Q96DA6 116 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 DYNLL2Q96FJ2 89 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 DNAJC1Q96KC8 554 aaKnown RBP3.81□□□□□ -1.8
SDHB-205ENST00000475506 CHID1Q9BWS9 393 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 YTHDF1Q9BYJ9 559 aaKnown RBP3.81□□□□□ -1.8
SDHB-205ENST00000475506 HAUS4Q9H6D7 363 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 MMP26Q9NRE1 261 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 SLC25A37Q9NYZ2 338 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 DDX19BQ9UMR2 479 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 TP53TG5Q9Y2B4 290 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 SAR1BQ9Y6B6 198 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 AGRNO00468 2067 aa3.81□□□□□ -1.8
SDHB-205ENST00000475506 WRNQ14191 1432 aaPredicted RBP eCLIP3.8□□□□□ -1.8
SDHB-205ENST00000475506 MAPK8IP3Q9UPT6 1336 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 IGKV3D-20A0A0C4DH25 116 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 PLPP1O14494 284 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 KMOO15229 486 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 RAD51CO43502 376 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 KLF8O95600 359 aaPredicted RBP3.8□□□□□ -1.8
SDHB-205ENST00000475506 OR5H8P0DN80 308 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 CALM1P0DP23 149 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 CALM2P0DP24 149 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 CALM3P0DP25 149 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 ZNF30P17039 623 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 LYZP61626 148 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 NDPQ00604 133 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 SEMG2Q02383 582 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 ORC2Q13416 577 aaPredicted RBP3.8□□□□□ -1.8
SDHB-205ENST00000475506 PSG5Q15238 335 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 RFX4Q33E94 735 aa3.8□□□□□ -1.8
SDHB-205ENST00000475506 CCNJQ5T5M9 372 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms