RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 SHPKQ9UHJ6 478 aa1.82□□□□□ -2.12
SSB-210ENST00000474273 CARHSP1Q9Y2V2 147 aaKnown RBP1.82□□□□□ -2.12
SSB-210ENST00000474273 NPTNQ9Y639 398 aa1.82□□□□□ -2.12
SSB-210ENST00000474273 CAMTA1Q9Y6Y1 1673 aa1.82□□□□□ -2.12
SSB-210ENST00000474273 FBN1P35555 2871 aaKnown RBP1.82□□□□□ -2.12
SSB-210ENST00000474273 RAB3DO95716 219 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 MX1P20591 662 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 AQP2P41181 271 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 ZNF92Q03936 586 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 MRPL28Q13084 256 aaKnown RBP1.81□□□□□ -2.12
SSB-210ENST00000474273 ZMYND11Q15326 602 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 TAF9Q16594 264 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 SPIN3Q5JUX0 258 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 TMEM135Q86UB9 458 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 MIR7-3HGQ8N6C7 128 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 FBXL13Q8NEE6 735 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 OR2G2Q8NGZ5 317 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 COQ8AQ8NI60 647 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 N4BP2L2Q92802 583 aaPredicted RBP1.81□□□□□ -2.12
SSB-210ENST00000474273 PKNOX2Q96KN3 472 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 TCHPQ9BT92 498 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 SLC25A2Q9BXI2 301 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 MFFQ9GZY8 342 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 ANKRA2Q9H9E1 313 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 CTSFQ9UBX1 484 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 HPCAL4Q9UM19 191 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 MRPS18BQ9Y676 258 aaKnown RBP1.81□□□□□ -2.12
SSB-210ENST00000474273 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
SSB-210ENST00000474273 CNTNAP1P78357 1384 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 ADGRL1O94910 1474 aa1.81□□□□□ -2.12
SSB-210ENST00000474273 FAM240BA0A1B0GVZ2 78 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 GOSR2O14653 212 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 HMMRO75330 724 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 CLPXO76031 633 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 ERLIN2O94905 339 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 SNX4O95219 450 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 HRH1P35367 487 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 ATP5C1P36542 298 aaKnown RBP1.8□□□□□ -2.12
SSB-210ENST00000474273 SERPINB5P36952 375 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 CEACAM6P40199 344 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 NSG1P42857 185 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 RORCP51449 518 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 PRRX1P54821 245 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 ACTR3P61158 418 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 ZNF616Q08AN1 781 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 SMUG1Q53HV7 270 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 PRAMEF5Q5TYX0 476 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 PRAMEF6Q5VXH4 476 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 DNAJC24Q6P3W2 148 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 CEMP1Q6PRD7 247 aaPredicted RBP1.8□□□□□ -2.12
SSB-210ENST00000474273 TEX43Q6ZNM6 134 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 CALHM1Q8IU99 346 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 CDH26Q8IXH8 852 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 PRSS58Q8IYP2 241 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 OR9K2Q8NGE7 335 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 AKR7LQ8NHP1 331 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 C15orf40Q8WUR7 153 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 CNDP1Q96KN2 507 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 HSFY1Q96LI6 401 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 P2RX4Q99571 388 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 SH3GL1Q99961 368 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 OR51M1Q9H341 326 aa1.8□□□□□ -2.12
SSB-210ENST00000474273 RPF2Q9H7B2 306 aaKnown RBP1.8□□□□□ -2.12
SSB-210ENST00000474273 MRPS12O15235 138 aaKnown RBP1.79□□□□□ -2.12
SSB-210ENST00000474273 YIF1AO95070 293 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 HLA-DQA1P01909 254 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 APCSP02743 223 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 SLC2A3P11169 496 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 COL8A2P25067 703 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 CASP14P31944 242 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 CXCL12P48061 93 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 KCNJ2P63252 427 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 MAB21L1Q13394 359 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 RGNQ15493 299 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 MRPL23Q16540 153 aaKnown RBP1.79□□□□□ -2.12
SSB-210ENST00000474273 ARL9Q6T311 187 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 OAFQ86UD1 273 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 FAM228AQ86W67 206 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 ZFP41Q8N8Y5 198 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 LINC01560Q8TB33 94 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 RAB3IL1Q8TBN0 382 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 FAM3DQ96BQ1 224 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 COL21A1Q96P44 957 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 TEKT3Q9BXF9 490 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 FGF20Q9NP95 211 aaPredicted RBP1.79□□□□□ -2.12
SSB-210ENST00000474273 COX16Q9P0S2 106 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 NID2Q14112 1375 aa1.79□□□□□ -2.12
SSB-210ENST00000474273 DENND4AQ7Z401 1863 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 SYNJ2BP-COX16A0A087WUM0 186 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 IGKV2-24A0A0C4DH68 120 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 MPHOSPH10O00566 681 aaKnown RBP1.78□□□□□ -2.12
SSB-210ENST00000474273 PSTPIP1O43586 416 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 CHST1O43916 411 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 GCM2O75603 506 aaPredicted RBP1.78□□□□□ -2.12
SSB-210ENST00000474273 PALMO75781 387 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 EIF3GO75821 320 aaKnown RBP eCLIP1.78□□□□□ -2.12
SSB-210ENST00000474273 OXTP01178 125 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 FGGP02679 453 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 SERPIND1P05546 499 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 PABPC4LP0CB38 370 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 378 ms