RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 F6UB75 175 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 AIM2O14862 343 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 CD5P06127 495 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 DCNP07585 359 aaKnown RBP1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 LINC00869P0C866 280 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 UBTFL6P0CB48 400 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 ZNF14P17017 642 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 MAS1LP35410 378 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 CDKN1BP46527 198 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 TPMTP51580 245 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 UBE2NP61088 152 aaKnown RBP1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 ZNF816Q0VGE8 651 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 PON2Q15165 354 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 ORMDL2Q53FV1 153 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 ANKRD26P1Q6NSI1 321 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 KDELC1Q6UW63 502 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 NTM-AS1Q6ZSK4 140 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 MYOCDQ8IZQ8 938 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 MS4A15Q8N5U1 240 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 B3GNT7Q8NFL0 401 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 OR2L3Q8NG85 312 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 OR9K2Q8NGE7 335 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 OR2A1Q8NGT9 310 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 TPD52L3Q96J77 140 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 C1orf198Q9H425 327 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 C12orf10Q9HB07 376 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 KCNJ16Q9NPI9 418 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 UXTQ9UBK9 157 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 MARCOQ9UEW3 520 aaPredicted RBP1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 TMCC3Q9ULS5 477 aa1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 MRPS18BQ9Y676 258 aaKnown RBP1.78□□□□□ -2.12
ECHDC1-213ENST00000474240 LRP4O75096 1905 aa1.78□□□□□ -2.13
ECHDC1-213ENST00000474240 SYNJ2BP-COX16A0A087WUM0 186 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 A0A0U1RQV1 116 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 ARHGEF35A5YM69 484 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 LRRIQ3A6PVS8 624 aaPredicted RBP1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 LYRM9A8MSI8 78 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 MPHOSPH10O00566 681 aaKnown RBP1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 CHMP2AO43633 222 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 CLIC3O95833 236 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 APCSP02743 223 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 CT62P0C5K7 136 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF43P17038 809 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 IL1RNP18510 177 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 OPRK1P41145 380 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF138P52744 262 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 ACTG2P63267 376 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 CDH17Q12864 832 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 IFT88Q13099 833 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 RGNQ15493 299 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 PTPN20Q4JDL3 420 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 SMUG1Q53HV7 270 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF684Q5T5D7 378 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 PRR9Q5T870 116 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 SNX20Q7Z614 316 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 CALHM3Q86XJ0 350 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 LGI3Q8N145 548 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 HSD17B11Q8NBQ5 300 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 SDR9C7Q8NEX9 313 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 OR56B2PQ8NGI1 322 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 OR8J1Q8NGP2 316 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 OR1S2Q8NGQ3 325 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 LILRB4Q8NHJ6 448 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 SLC2A14Q8TDB8 520 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 RTN4IP1Q8WWV3 396 aaPredicted RBP1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 MRGPRFQ96AM1 343 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 RMI2Q96E14 147 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 PKNOX2Q96KN3 472 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 ULBP2Q9BZM5 246 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 SPNS1Q9H2V7 528 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 IKBKGQ9Y6K9 419 aa1.77□□□□□ -2.13
ECHDC1-213ENST00000474240 AKNAQ7Z591 1439 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 IGHV1OR15-9A0A0B4J2B8 117 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF816-ZNF321PA0A0X1KG74 233 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF850A8MQ14 1090 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 SGK1O00141 431 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 DPM1O60762 260 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CLPXO76031 633 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 HLA-DQA1P01909 254 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CD74P04233 296 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CRYGBP07316 175 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 ZNF688P0C7X2 276 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 PABPC4LP0CB38 370 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 RAB3AP20336 220 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CALRP27797 417 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 RRM2P31350 389 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 SSTR5P35346 364 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 NAA10P41227 235 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CXCL12P48061 93 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 PRRX1P54821 245 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CDH6P55285 790 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 ACTR3P61158 418 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 CACNG7P62955 275 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 IRX3P78415 501 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 PITPNAQ00169 270 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 MXD1Q05195 221 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 KRTAP13-2Q52LG2 175 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 AVPI1Q5T686 147 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 METTL21CQ5VZV1 264 aa1.76□□□□□ -2.13
ECHDC1-213ENST00000474240 PRMT9Q6P2P2 845 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms