RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SH3GL3Q99963 347 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 GABARAPL3Q9BY60 117 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 UBXN6Q9BZV1 441 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 TMEM9BQ9NQ34 198 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 SHPKQ9UHJ6 478 aa4.81□□□□□ -1.64
SMC5-202ENST00000471372 EPOPA6NHQ4 379 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 K7ERQ8 282 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 XRCC2O43543 280 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 GMDSO60547 372 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 NMT2O60551 498 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 AQP8O94778 261 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 SUPT7LO94864 414 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 ETHE1O95571 254 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 C6orf47O95873 294 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 MT3P25713 68 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 HRH1P35367 487 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 ZSCAN26Q16670 478 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 CBLN2Q8IUK8 224 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 KIF2BQ8N4N8 673 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 GATSQ8NAP1 163 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 OR4F15Q8NGB8 312 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 GEMIN6Q8WXD5 167 aaKnown RBP4.8□□□□□ -1.64
SMC5-202ENST00000471372 LRRC58Q96CX6 371 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 FOXN4Q96NZ1 517 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 OR11A1Q9GZK7 315 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 PATZ1Q9HBE1 687 aaKnown RBP4.8□□□□□ -1.64
SMC5-202ENST00000471372 MRM3Q9HC36 420 aaKnown RBP4.8□□□□□ -1.64
SMC5-202ENST00000471372 CD209Q9NNX6 404 aa4.8□□□□□ -1.64
SMC5-202ENST00000471372 RBMX2Q9Y388 322 aaKnown RBP4.8□□□□□ -1.64
SMC5-202ENST00000471372 RAI1Q7Z5J4 1906 aaPredicted RBP4.8□□□□□ -1.64
SMC5-202ENST00000471372 COL22A1Q8NFW1 1626 aaPredicted RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 CEMIPQ8WUJ3 1361 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 MROH7Q68CQ1 1323 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 TRAV39A0A0B4J263 110 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 GSTTP1A0A1W2PQM5 241 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 NCBP2LA6PVI3 153 aaKnown RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 A8MUA0 341 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 TNFSF11O14788 317 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 POLR3GO15318 223 aaPredicted RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 RAD51CO43502 376 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 MMP23AO75900 390 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 TDP2O95551 362 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 KLK1P06870 262 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 GIPP09681 153 aaPredicted RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 AK4P27144 223 aaPredicted RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 LRRC10Q5BKY1 277 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 C9orf129Q5T035 196 aaKnown RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 BAIAP2L2Q6UXY1 529 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 PEX26Q7Z412 305 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 C14orf178Q8N769 122 aaPredicted RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 OR2G3Q8NGZ4 309 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 BAALCQ8WXS3 180 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 TFGQ92734 400 aaPredicted RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 C16orf74Q96GX8 76 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 ATP6V1G3Q96LB4 118 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 HINT2Q9BX68 163 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 CLMPQ9H6B4 373 aa4.79□□□□□ -1.64
SMC5-202ENST00000471372 UBE2ZQ9H832 354 aaPredicted RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 MRPS18BQ9Y676 258 aaKnown RBP4.79□□□□□ -1.64
SMC5-202ENST00000471372 EIF4G1Q04637 1599 aaKnown RBP4.78□□□□□ -1.64
SMC5-202ENST00000471372 A0A0G2JN53 185 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 CENPXA8MT69 81 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 SLC31A2O15432 143 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 MPDU1O75352 247 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 ENTPD5O75356 428 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 MOSP00540 346 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 APOA1P02647 267 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 HPGDP15428 266 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 PRKACBP22694 351 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 CSNK1DP48730 415 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 VEGFCP49767 419 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 NCBP2P52298 156 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMC5-202ENST00000471372 YWHAEP62258 255 aaKnown RBP4.78□□□□□ -1.64
SMC5-202ENST00000471372 SLC1A5Q15758 541 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 SGCAQ16586 387 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 TPRG1LQ5T0D9 272 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 CCNJQ5T5M9 372 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 ZNF544Q6NX49 715 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 DEGS2Q6QHC5 323 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 RNF165Q6ZSG1 346 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 TMEM179Q6ZVK1 233 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 SLC35D2Q76EJ3 337 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 VKORC1L1Q8N0U8 176 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 ARRDC1Q8N5I2 433 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 ZNF485Q8NCK3 441 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 ACER1Q8TDN7 264 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 FAM131CQ96AQ9 280 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 MICU1Q9BPX6 476 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 KRTAP1-5Q9BYS1 174 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 SLCO1B3Q9NPD5 702 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 MCUBQ9NWR8 336 aa4.78□□□□□ -1.64
SMC5-202ENST00000471372 F11RQ9Y624 299 aaKnown RBP4.78□□□□□ -1.64
SMC5-202ENST00000471372 HSBP1L1C9JCN9 74 aa4.77□□□□□ -1.65
SMC5-202ENST00000471372 FAM189A1O60320 539 aa4.77□□□□□ -1.65
SMC5-202ENST00000471372 HPNP05981 417 aa4.77□□□□□ -1.65
SMC5-202ENST00000471372 IGHV3-43DP0DP04 118 aa4.77□□□□□ -1.65
SMC5-202ENST00000471372 CCL2P13500 99 aa4.77□□□□□ -1.65
SMC5-202ENST00000471372 GGT1P19440 569 aa4.77□□□□□ -1.65
SMC5-202ENST00000471372 RAB4AP20338 218 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms