RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 HLA-HP01893 362 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 IGHV3-43DP0DP04 118 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 AK4P27144 223 aaPredicted RBP2.39□□□□□ -2.03
BRCA2-202ENST00000470094 CD82P27701 267 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 SH3BGRP55822 239 aaPredicted RBP2.39□□□□□ -2.03
BRCA2-202ENST00000470094 CLDN18P56856 261 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 HERVK_113P61574 105 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 REG3AQ06141 175 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 CLINT1Q14677 625 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 SGCAQ16586 387 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 STUMQ69YW2 141 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 LCN12Q6JVE5 192 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 SPESP1Q6UW49 350 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 C6orf89Q6UWU4 347 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 CMC1Q7Z7K0 106 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 OR4F15Q8NGB8 312 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 OR10G9Q8NGN4 311 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 OR2G3Q8NGZ4 309 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 NUBPLQ8TB37 319 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 KIAA1143Q96AT1 154 aaPredicted RBP2.39□□□□□ -2.03
BRCA2-202ENST00000470094 CERS2Q96G23 380 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 JSRP1Q96MG2 331 aaPredicted RBP2.39□□□□□ -2.03
BRCA2-202ENST00000470094 ECSITQ9BQ95 431 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 RETNQ9HD89 108 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 SAMSN1Q9NSI8 373 aaKnown RBP2.39□□□□□ -2.03
BRCA2-202ENST00000470094 NUFIP1Q9UHK0 495 aaKnown RBP2.39□□□□□ -2.03
BRCA2-202ENST00000470094 MROH7-TTC4A0A0A0MT08 1334 aa2.39□□□□□ -2.03
BRCA2-202ENST00000470094 PIK3R4Q99570 1358 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 IGKV6-21A0A0C4DH24 114 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 A0A1B0GW55 424 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 NKX2-6A6NCS4 301 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 HIDE1A8MVS5 230 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 PEX7O00628 323 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 DPM1O60762 260 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 CLDN11O75508 207 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 UTS2O95399 124 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 AIFM1O95831 613 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 SNAI1O95863 264 aaPredicted RBP2.38□□□□□ -2.03
BRCA2-202ENST00000470094 C6orf47O95873 294 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 MOSP00540 346 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 IFNW1P05000 195 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 CRYGCP07315 174 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 RHOXF2BP0C7M4 288 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 DUX4L2P0CJ85 424 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 DUX4L3P0CJ86 424 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 DUX4L5P0CJ88 424 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 DUX4L6P0CJ89 424 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 DUX4L7P0CJ90 424 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 CT45A6P0DMU7 189 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 CT45A5P0DMU8 189 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 CT45A7P0DMV0 189 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 TDGF1P13385 188 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 HPGDP15428 266 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 MSR1P21757 451 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 SLC1A2P43004 574 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 ETV1P50549 477 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 BCAP31P51572 246 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 TDGF1P3P51864 188 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 NCBP2P52298 156 aaKnown RBP eCLIP2.38□□□□□ -2.03
BRCA2-202ENST00000470094 LINC00315P59091 139 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 PFN3P60673 137 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 NUTF2P61970 127 aaKnown RBP2.38□□□□□ -2.03
BRCA2-202ENST00000470094 SP4Q02446 784 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 AQP6Q13520 282 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 TRAM2Q15035 370 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 NCF4Q15080 339 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF726P1Q15940 193 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 CT45A1Q5HYN5 189 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF691Q5VV52 312 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 SPECC1LQ69YQ0 1117 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 DUX4L9Q6RFH8 374 aaPredicted RBP2.38□□□□□ -2.03
BRCA2-202ENST00000470094 MBOAT1Q6ZNC8 495 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 ACP7Q6ZNF0 438 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 COX15Q7KZN9 410 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 FAM122BQ7Z309 247 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 HDDC2Q7Z4H3 204 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
BRCA2-202ENST00000470094 LRRC75AQ8NAA5 344 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 OR56A4Q8NGH8 313 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 CT45A3Q8NHU0 189 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 GEMIN6Q8WXD5 167 aaKnown RBP2.38□□□□□ -2.03
BRCA2-202ENST00000470094 LRRC58Q96CX6 371 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 ASB9Q96DX5 294 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 FAM210BQ96KR6 192 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 OPALINQ96PE5 141 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 P2RX4Q99571 388 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 RHOXF2Q9BQY4 288 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 ZYG11BQ9C0D3 744 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 VCXQ9H320 206 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 RPF2Q9H7B2 306 aaKnown RBP2.38□□□□□ -2.03
BRCA2-202ENST00000470094 CTPS2Q9NRF8 586 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 DUX4Q9UBX2 424 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 PSG11Q9UQ72 335 aa2.38□□□□□ -2.03
BRCA2-202ENST00000470094 ANKRD63C9JTQ0 380 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 H0YHG0 523 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 H3BNH8 94 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 TMX2-CTNND1H3BSU7 103 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF701M0R085 212 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-202ENST00000470094 BCKDKO14874 412 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 ZBTB5O15062 677 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms