RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	RNF128	Q8TEB7	428 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	ABHD3	Q8WU67	409 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	RGP1	Q92546	391 aa	Predicted RBP	10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	AP3S1	Q92572	193 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	INTS12	Q96CB8	462 aa	Known RBP	10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	MAP6	Q96JE9	813 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	C4orf45	Q96LM5	186 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	OR14A2	Q96R54	314 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	SMAD5	Q99717	465 aa	Known RBP	10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	SCNM1	Q9BWG6	230 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	ULBP2	Q9BZM5	246 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	COMMD4	Q9H0A8	199 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	DEFB127	Q9H1M4	99 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	PPIL3	Q9H2H8	161 aa	Known RBP	10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	LDAH	Q9H6V9	325 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	ZDHHC11	Q9H8X9	412 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	POLE4	Q9NR33	117 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	FRRS1L	Q9P0K9	344 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	UGT2A1	Q9Y4X1	527 aa		10.9	□□□□□ -0.66
HDLBP-231	ENST00000467435	TRGV5	A0A0B4J1U4	118 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435		A0A1B0GTH9	108 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	TMEM212	A6NML5	194 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	OR4C45	A6NMZ5	311 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	TFEC	O14948	347 aa	Predicted RBP	10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	ZNF254	O75437	659 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	ARL6IP5	O75915	188 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	ZNF24	P17028	368 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	KIR3DL2	P43630	455 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	CAV3	P56539	151 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	MFGE8	Q08431	387 aa	Predicted RBP	10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	INA	Q16352	499 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	C3AR1	Q16581	482 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	RNFT1	Q5M7Z0	435 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	FDX2	Q6P4F2	183 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	FOXL2NB	Q6ZUU3	175 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	PRSS35	Q8N3Z0	413 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	ZNF676	Q8N7Q3	588 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	TEX19	Q8NA77	164 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	OR2AJ1	Q8NGZ0	328 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	RNF133	Q8WVZ7	376 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	HTRA1	Q92743	480 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	TMEM45B	Q96B21	275 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	SLAMF6	Q96DU3	332 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	CEP19	Q96LK0	163 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	DCBLD2	Q96PD2	775 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	C1orf198	Q9H425	327 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	SPRR3	Q9UBC9	169 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	CYB5R1	Q9UHQ9	305 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	GDF2	Q9UK05	429 aa	Predicted RBP	10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	MCTS1	Q9ULC4	181 aa	Known RBP	10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	GTF2A1L	Q9UNN4	478 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	LHFPL6	Q9Y693	200 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435		R4GMQ9	66 aa		10.89	□□□□□ -0.67
HDLBP-231	ENST00000467435	FAM186A	A6NE01	2351 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435		A0A087WV48	116 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	ZNF879	B4DU55	563 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	DHH	O43323	396 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	UCHL1	P09936	223 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	H2BFM	P0C1H6	154 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	MSR1	P21757	451 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	ZNF84	P51523	738 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	CCR9	P51686	369 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	DEGS2	Q6QHC5	323 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	CFAP77	Q6ZQR2	320 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	TPRA1	Q86W33	373 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	GPR137C	Q8N3F9	429 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	PHYHIP	Q92561	330 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	ZNF775	Q96BV0	537 aa	Predicted RBP	10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	RBM24	Q9BX46	236 aa	Known RBP	10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	NELFA	Q9H3P2	528 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	PALMD	Q9NP74	551 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	B3GAT2	Q9NPZ5	323 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	CENPM	Q9NSP4	180 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	EMC3	Q9P0I2	261 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	FBXL3	Q9UKT7	428 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	CMAHP	Q9Y471	501 aa		10.88	□□□□□ -0.67
HDLBP-231	ENST00000467435	DMXL1	Q9Y485	3027 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	CNOT1	A5YKK6	2376 aa	Known RBP	10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	IGKV3D-15	A0A087WSY6	115 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	TRAV1-2	A0A0B4J238	106 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	TRBV5-5	A0A0J9YX44	114 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435		A0A1W2PPK0	400 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	ACOD1	A6NK06	481 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	ZNF878	C9JN71	531 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	LOC110117498-PIK3R3	F6TDL0	507 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	CTDSP2	O14595	271 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	GPR171	O14626	319 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	RGS5	O15539	181 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	SRSF10	O75494	262 aa	Known RBP	10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	PNP	P00491	289 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	CFL1	P23528	166 aa	Known RBP	10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	MAPK3	P27361	379 aa	Predicted RBP	10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	GUCA1A	P43080	201 aa	Predicted RBP	10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	LSM6	P62312	80 aa	Known RBP	10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	SGCA	Q16586	387 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435	ODF4	Q2M2E3	257 aa		10.87	□□□□□ -0.67
HDLBP-231	ENST00000467435		Q499Y3	187 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms