RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 NDRG4Q9ULP0 352 aaKnown RBP14.96□□□□□ -0.01
COL7A1-206ENST00000466591 UGT2A1Q9Y4X1 527 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 MXRA5Q9NR99 2828 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 FAM157AC9JC47 383 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 H7C1C5 153 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 MPZL1O95297 269 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 ABHD16AO95870 558 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 IGHMP01871 453 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 COX4I1P13073 169 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 ITGA2P17301 1181 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 MAKP20794 623 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 GSTM3P21266 225 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 LIPAP38571 399 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 CRYBB2P43320 205 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 ZNF133P52736 654 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-206ENST00000466591 LCN6P62502 163 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 PRKCDQ05655 676 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 SCRN3Q0VDG4 424 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 FGD3Q5JSP0 725 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 FAM209AQ5JX71 171 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 CGB2Q6NT52 195 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 SLC25A47Q6Q0C1 308 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 ZER1Q7Z7L7 766 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 RNF113BQ8IZP6 322 aaKnown RBP14.95□□□□□ -0.02
COL7A1-206ENST00000466591 CLDN22Q8N7P3 220 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 ZNF418Q8TF45 676 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-206ENST00000466591 NABP1Q96AH0 204 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 C1orf159Q96HA4 380 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 HSH2DQ96JZ2 352 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 OR2J1Q9GZK6 312 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 CMTM6Q9NX76 183 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 UBAP1Q9NZ09 502 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 CGGBP1Q9UFW8 167 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-206ENST00000466591 TMEM5Q9Y2B1 443 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 CUBNO60494 3623 aa14.95□□□□□ -0.02
COL7A1-206ENST00000466591 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL7A1-206ENST00000466591 IGKV1D-43A0A0B4J1Z2 117 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 A0A0G2JMP0 313 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 A0A0X1KG70 313 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 WNT9BO14905 357 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 DOK2O60496 412 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 RP2O75695 350 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 PNPP00491 289 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 TNFSF4P23510 183 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 HTR5AP47898 357 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 CENPAP49450 140 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 KRT72Q14CN4 511 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 ZNF774Q6NX45 483 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 MBOAT2Q6ZWT7 520 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 ZNF101Q8IZC7 436 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 OR4M2Q8NGB6 313 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 KLF14Q8TD94 323 aaPredicted RBP14.94□□□□□ -0.02
COL7A1-206ENST00000466591 ST7LQ8TDW4 575 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 POM121L2Q96KW2 1035 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 C4orf45Q96LM5 186 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 RPS6KA6Q9UK32 745 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 POLR1DQ9Y2S0 133 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 SNX13Q9Y5W8 968 aa14.94□□□□□ -0.02
COL7A1-206ENST00000466591 RGS9O75916 674 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-206ENST00000466591 TSPAN19P0C672 248 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 WNT5AP41221 380 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 RFPL4BQ6ZWI9 263 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 SLC15A3Q8IY34 581 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 GTF3AQ92664 365 aaKnown RBP14.93□□□□□ -0.02
COL7A1-206ENST00000466591 DIRC2Q96SL1 478 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 ZDHHC8Q9ULC8 765 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 PCDHB10Q9UN67 800 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 AURKCQ9UQB9 309 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 WIPI2Q9Y4P8 454 aa14.93□□□□□ -0.02
COL7A1-206ENST00000466591 LOC100509620A0A075B734 347 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 H3BSA7 217 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 IGHV1-46P01743 117 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 MPV17P39210 176 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 GSK3BP49841 420 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 ACTG1P63261 375 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 ZBED5Q49AG3 693 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 MBNL2Q5VZF2 373 aaKnown RBP14.92□□□□□ -0.02
COL7A1-206ENST00000466591 C1orf94Q6P1W5 598 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 CBLL1Q75N03 491 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 SYT9Q86SS6 491 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 NPEPL1Q8NDH3 523 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 NMD3Q96D46 503 aaKnown RBP14.92□□□□□ -0.02
COL7A1-206ENST00000466591 MARS2Q96GW9 593 aaKnown RBP14.92□□□□□ -0.02
COL7A1-206ENST00000466591 FAM46AQ96IP4 442 aaKnown RBP14.92□□□□□ -0.02
COL7A1-206ENST00000466591 RACGAP1Q9H0H5 632 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 WNT5BQ9H1J7 359 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 EMC7Q9NPA0 242 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 POLE4Q9NR33 117 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 PLEK2Q9NYT0 353 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 ADA2Q9NZK5 511 aa14.92□□□□□ -0.02
COL7A1-206ENST00000466591 A0A087WUU8 490 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 NME4O00746 187 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 SGCEO43556 437 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 H1F0P07305 194 aaKnown RBP14.91□□□□□ -0.02
COL7A1-206ENST00000466591 CD14P08571 375 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 NCK1P16333 377 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 MDH1P40925 334 aaKnown RBP14.91□□□□□ -0.02
COL7A1-206ENST00000466591 TNFAIP6P98066 277 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-206ENST00000466591 MTX3Q5HYI7 312 aa14.91□□□□□ -0.02
COL7A1-206ENST00000466591 DCAF12L2Q5VW00 463 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms