RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 C11orf40Q8WZ69 217 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 RBM4Q9BWF3 364 aaKnown RBP12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 GABARAPL1Q9H0R8 117 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 C1orf198Q9H425 327 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 S100A14Q9HCY8 104 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 CMC2Q9NRP2 79 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 CA10Q9NS85 328 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 KRT84Q9NSB2 600 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 OAZ3Q9UMX2 235 aa12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
SQSTM1-205ENST00000464493 RTTNQ86VV8 2226 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 RIIAD1A6NNX1 92 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 FAM171A2A8MVW0 826 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 TMCC2O75069 709 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 GPANK1O95872 356 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 HMGN1P05114 100 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 ZNF3P17036 446 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 NR4A1P22736 598 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 CRISP1P54107 249 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 DBPQ10586 325 aaPredicted RBP12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 DAG1Q14118 895 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 CRMP1Q14194 572 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 TBC1D28Q2M2D7 210 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 AGAP6Q5VW22 663 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 OTPQ5XKR4 325 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 KDM4DQ6B0I6 523 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 FBXL14Q8N1E6 418 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 MUC15Q8N387 334 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 ICA1LQ8NDH6 482 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 OR1J2Q8NGS2 313 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 OR2T4Q8NH00 348 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 AKR7LQ8NHP1 331 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 TEX12Q9BXU0 123 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 OR2H1Q9GZK4 316 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 WNT5BQ9H1J7 359 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 CXorf56Q9H5V9 222 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 SPEF1Q9Y4P9 236 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 OTOGQ6ZRI0 2925 aa12.56□□□□□ -0.4
SQSTM1-205ENST00000464493 SAC3D1A6NKF1 404 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 VSTM5A8MXK1 200 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 SMPD2O60906 423 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 MITFO75030 526 aaPredicted RBP12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 CD8AP01732 235 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 HLA-DQA2P01906 255 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 GAAP10253 952 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 CCL2P13500 99 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 STOMP27105 288 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 APEX1P27695 318 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 PYCR1P32322 319 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 APLNRP35414 380 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 ART1P52961 327 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 SLC25A1P53007 311 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 ESRRGP62508 458 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 GALK2Q01415 458 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 TEKQ02763 1124 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 AQP6Q13520 282 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 MEP1BQ16820 701 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 KRT80Q6KB66 452 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 VHLLQ6RSH7 139 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 DTX2Q86UW9 622 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 PROKR2Q8NFJ6 384 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 SLC26A10Q8NG04 563 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 FOXC2Q99958 501 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 TRAF4Q9BUZ4 470 aaPredicted RBP12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 OSBPL10Q9BXB5 764 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 CDH20Q9HBT6 801 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 CBLN4Q9NTU7 201 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 ASH2LQ9UBL3 628 aa12.55□□□□□ -0.4
SQSTM1-205ENST00000464493 AKAP9Q99996 3911 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 SURF4O15260 269 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 TFP02787 698 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 IGFBP5P24593 272 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 THBS4P35443 961 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 SERPINF1P36955 418 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 NKX6-1P78426 367 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 SNTB2Q13425 540 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 PTGES3Q15185 160 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 TMEM236Q5W0B7 351 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 PAQR4Q8N4S7 273 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 OR51L1Q8NGJ5 315 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 OR9Q1Q8NGQ5 310 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 ZNRF4Q8WWF5 429 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 OTULINQ96BN8 352 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 RBM4BQ9BQ04 359 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 NMNAT2Q9BZQ4 307 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 GRIP2Q9C0E4 1043 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 ZNF442Q9H7R0 627 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 SLC25A19Q9HC21 320 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 ENOPH1Q9UHY7 261 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 POLR1DQ9Y2S0 133 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 ARID1AO14497 2285 aa12.54□□□□□ -0.4
SQSTM1-205ENST00000464493 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 C5orf49A4QMS7 147 aa12.53□□□□□ -0.4
SQSTM1-205ENST00000464493 FAM183AA6NL82 134 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms