RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 ERVK-25P63136 954 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 LCN2P80188 198 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 MRPS22P82650 360 aaKnown RBP3.16□□□□□ -1.9
USP25-207ENST00000464435 SELENBP1Q13228 472 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 GPR107Q5VW38 600 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 STUMQ69YW2 141 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 CNIH2Q6PI25 160 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 Q6ZSR3 168 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 JAGN1Q8N5M9 183 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 ACER1Q8TDN7 264 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 NAT6Q93015 286 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 FAM131CQ96AQ9 280 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 CCDC124Q96CT7 223 aaKnown RBP3.16□□□□□ -1.9
USP25-207ENST00000464435 GLT1D1Q96MS3 346 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 OPALINQ96PE5 141 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 CSPG4P5Q96PW8 444 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 XPO6Q96QU8 1125 aaKnown RBP3.16□□□□□ -1.9
USP25-207ENST00000464435 NAPGQ99747 312 aaPredicted RBP3.16□□□□□ -1.9
USP25-207ENST00000464435 ATP5SQ99766 215 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 SLC29A1Q99808 456 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 ZNF302Q9NR11 478 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 GPATCH2LQ9NWQ4 482 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 RPS6KB2Q9UBS0 482 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 NEU3Q9UQ49 428 aa3.16□□□□□ -1.9
USP25-207ENST00000464435 RBMX2Q9Y388 322 aaKnown RBP3.16□□□□□ -1.9
USP25-207ENST00000464435 ERVV-1B6SEH8 477 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 DYNC1I1O14576 645 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 NIPSNAP2O75323 286 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 FCN3O75636 299 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 SCELO95171 688 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 TCN1P20061 433 aaPredicted RBP3.15□□□□□ -1.91
USP25-207ENST00000464435 SLC1A1P43005 524 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 WNT4P56705 351 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 FBXW4P57775 412 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 LRRC63Q05C16 580 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 PSG5Q15238 335 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 HSDL1Q3SXM5 330 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 PTPN20Q4JDL3 420 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 C2orf83Q53S99 150 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 LRRC10Q5BKY1 277 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 PPM1LQ5SGD2 360 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 LY6G6FQ5SQ64 297 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 LCN12Q6JVE5 192 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 LRRC8AQ8IWT6 810 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 MYOCDQ8IZQ8 938 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 ZADH2Q8N4Q0 377 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 MS4A15Q8N5U1 240 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 C8orf31Q8N9H6 132 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 TTC29Q8NA56 475 aaPredicted RBP3.15□□□□□ -1.91
USP25-207ENST00000464435 GATSQ8NAP1 163 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 OR2G2Q8NGZ5 317 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 MED8Q96G25 268 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 C8orf76Q96K31 380 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 SLC35E1Q96K37 410 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 ZNF396Q96N95 335 aaPredicted RBP3.15□□□□□ -1.91
USP25-207ENST00000464435 RARRES2Q99969 163 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 NRIP2Q9BQI9 281 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 ACBD6Q9BR61 282 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 FRMD8P1Q9BZ68 369 aaPredicted RBP3.15□□□□□ -1.91
USP25-207ENST00000464435 RAB1BQ9H0U4 201 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 NANOGQ9H9S0 305 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 UGT1A7Q9HAW7 530 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 UGT1A8Q9HAW9 530 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 MRPL47Q9HD33 250 aaKnown RBP3.15□□□□□ -1.91
USP25-207ENST00000464435 XCL2Q9UBD3 114 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 UXTQ9UBK9 157 aaPredicted RBP3.15□□□□□ -1.91
USP25-207ENST00000464435 ZNF225Q9UK10 706 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 TRAPPC4Q9Y296 219 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 ATP6V1DQ9Y5K8 247 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 MYO3BQ8WXR4 1341 aa3.15□□□□□ -1.91
USP25-207ENST00000464435 MEGF6O75095 1541 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 TRAV6A0A075B6T7 132 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 IGKV1D-13A0A0B4J2D9 117 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 A0A0G2JN53 185 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 NDUFAB1O14561 156 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 SIVA1O15304 175 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 SOX15O60248 233 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 CRTAPO75718 401 aaPredicted RBP3.14□□□□□ -1.91
USP25-207ENST00000464435 CDK14O94921 469 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 IFNW1P05000 195 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 IGHV4-34P06331 123 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 C2P06681 752 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 IGKV1-13P0DP09 117 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 RCC1P18754 421 aaPredicted RBP3.14□□□□□ -1.91
USP25-207ENST00000464435 PMCHP20382 165 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 NUDT1P36639 197 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 NSG1P42857 185 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 GPR6P46095 362 aaPredicted RBP3.14□□□□□ -1.91
USP25-207ENST00000464435 BLVRAP53004 296 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 SUB1P53999 127 aaKnown RBP eCLIP3.14□□□□□ -1.91
USP25-207ENST00000464435 FGF8P55075 233 aaPredicted RBP3.14□□□□□ -1.91
USP25-207ENST00000464435 FZD2Q14332 565 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 VAMP3Q15836 100 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 SOHLH1Q5JUK2 328 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 ZNF836Q6ZNA1 936 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 COX15Q7KZN9 410 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 HDDC2Q7Z4H3 204 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 LHFPL3Q86UP9 236 aa3.14□□□□□ -1.91
USP25-207ENST00000464435 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms