RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 KIAA1644Q3SXP7 199 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 LIPJQ5W064 366 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 TTC27Q6P3X3 843 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 TUSC5Q8IXB3 177 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 TIGD4Q8IY51 512 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 ZNF540Q8NDQ6 660 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 TRIM58Q8NG06 486 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 OR52N5Q8NH56 324 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 SETD6Q8TBK2 473 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 ZNF418Q8TF45 676 aaPredicted RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 ABHD3Q8WU67 409 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 ZNF75CPQ92670 426 aaPredicted RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 EFHD2Q96C19 240 aaPredicted RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 DUX3Q96PT4 197 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 ATOH8Q96SQ7 321 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 KLHDC3Q9BQ90 382 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 PSD2Q9BQI7 771 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 INPP5KQ9BT40 448 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 SRXN1Q9BYN0 137 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 RACGAP1Q9H0H5 632 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 FN3KQ9H479 309 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 METTL17Q9H7H0 456 aaPredicted RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 COQ10BQ9H8M1 238 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 FAM120CQ9NX05 1096 aaKnown RBP4.03□□□□□ -1.76
COPS3-204ENST00000462236 BCAP29Q9UHQ4 241 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 GRID1Q9ULK0 1009 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 DNAH1Q9P2D7 4330 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 SACSQ9NZJ4 4579 aa4.03□□□□□ -1.76
COPS3-204ENST00000462236 A0A087WZY1 265 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 TRAV24A0A0B4J272 114 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 K7EPI3 171 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 PDLIM1O00151 329 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 KLF11O14901 512 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 SCO2O43819 266 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 BCAS2O75934 225 aaPredicted RBP4.02□□□□□ -1.77
COPS3-204ENST00000462236 LYZL6O75951 148 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 CLPTM1O96005 669 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 FGGP02679 453 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 GBAP04062 536 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 YES1P07947 543 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 SMIM18P0DKX4 95 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 CSNK2A2P19784 350 aaPredicted RBP4.02□□□□□ -1.77
COPS3-204ENST00000462236 MT3P25713 68 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 FEN1P39748 380 aaKnown RBP4.02□□□□□ -1.77
COPS3-204ENST00000462236 MAP3K8P41279 467 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 KCNJ10P78508 379 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 MRPS22P82650 360 aaKnown RBP4.02□□□□□ -1.77
COPS3-204ENST00000462236 CHRNB3Q05901 458 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 PLPPR5Q32ZL2 321 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 CPTPQ5TA50 214 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 UGT2A3Q6UWM9 527 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 FRA10AC1Q70Z53 315 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 METTL4Q8N3J2 472 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 WDR31Q8NA23 367 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 FAM110BQ8TC76 370 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 MAIP1Q8WWC4 291 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 OSTF1Q92882 214 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 CPNE4Q96A23 557 aaPredicted RBP4.02□□□□□ -1.77
COPS3-204ENST00000462236 TM4SF18Q96CE8 201 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 MUCL1Q96DR8 90 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 OTUB1Q96FW1 271 aaPredicted RBP4.02□□□□□ -1.77
COPS3-204ENST00000462236 CENPKQ9BS16 269 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 NAT9Q9BTE0 207 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 PRRG4Q9BZD6 226 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 SLITRK2Q9H156 845 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 RHOJQ9H4E5 214 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 PTGES2Q9H7Z7 377 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 Q9H8V8 135 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 ANKRA2Q9H9E1 313 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 SDF2L1Q9HCN8 221 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 A4GALTQ9NPC4 353 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 GSN-AS1Q9NRJ2 163 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 SDHAF3Q9NRP4 125 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 TXNDC16Q9P2K2 825 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 DAPK2Q9UIK4 370 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 ACOT9Q9Y305 439 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 FKBP7Q9Y680 259 aa4.02□□□□□ -1.77
COPS3-204ENST00000462236 EPPK1P58107 5090 aaKnown RBP4.02□□□□□ -1.77
COPS3-204ENST00000462236 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 A0A1W2PRQ8 180 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 HTR3EA5X5Y0 456 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 GOLGA6L10A6NI86 522 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 ZNF724A8MTY0 619 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 B4DSR2 109 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 ARPC2O15144 300 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 CIDEAO60543 219 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 PDE5AO76074 875 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 DFFBO76075 338 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 SYNGR4O95473 234 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 ANGPTL1O95841 491 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 KLK1P06870 262 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 PABPC4LP0CB38 370 aaKnown RBP4.01□□□□□ -1.77
COPS3-204ENST00000462236 GGT1P19440 569 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 PGCP20142 388 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 PCMT1P22061 227 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 IVDP26440 423 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 ELK4P28324 431 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 IL12BP29460 328 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 PPOXP50336 477 aa4.01□□□□□ -1.77
COPS3-204ENST00000462236 CARD18P57730 90 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms