RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 STAC2Q6ZMT1 411 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 KDM8Q8N371 416 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 LRRC17Q8N6Y2 441 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 STEAP2Q8NFT2 490 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 OR4M1Q8NGD0 313 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 DEDD2Q8WXF8 326 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 KISS1RQ969F8 398 aaPredicted RBP9.78□□□□□ -0.84
APTX-209ENST00000460940 FUZQ9BT04 418 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 RANGRFQ9HD47 186 aaPredicted RBP9.78□□□□□ -0.84
APTX-209ENST00000460940 ASB6Q9NWX5 421 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 NDRG3Q9UGV2 375 aa9.78□□□□□ -0.84
APTX-209ENST00000460940 NPIPB13A6NJU9 1138 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 NPIPB4C9JG80 1138 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 ATP6V1G2-DDX39BF2Z307 99 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 RNF13O43567 381 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 SLC43A1O75387 559 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 FADS2O95864 444 aaKnown RBP9.77□□□□□ -0.85
APTX-209ENST00000460940 ADAP00813 363 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 S100A6P06703 90 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 SAGP10523 405 aaPredicted RBP9.77□□□□□ -0.85
APTX-209ENST00000460940 DBTP11182 482 aaKnown RBP9.77□□□□□ -0.85
APTX-209ENST00000460940 AHCYP23526 432 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 EDNRAP25101 427 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 IFNGR2P38484 337 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 CENPAP49450 140 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 CLDN17P56750 224 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 RPS4XP62701 263 aaKnown RBP9.77□□□□□ -0.85
APTX-209ENST00000460940 IL5RAQ01344 420 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 SFRP5Q5T4F7 317 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 ZNF787Q6DD87 383 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 NIPAL3Q6P499 406 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 TMPRSS11FQ6ZWK6 438 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 SSX8Q7RTT4 187 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 CXorf67Q86X51 503 aaPredicted RBP9.77□□□□□ -0.85
APTX-209ENST00000460940 HIPK1Q86Z02 1210 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 RDH10Q8IZV5 341 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 UBE2J2Q8N2K1 259 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 OR4K5Q8NGD3 323 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 CNIH3Q8TBE1 160 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 C14orf79Q96F83 325 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 ADAD1Q96M93 576 aaKnown RBP9.77□□□□□ -0.85
APTX-209ENST00000460940 SLC30A2Q9BRI3 323 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 LINC00470Q9BZP3 86 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 GABARAPL1Q9H0R8 117 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 TAS2R16Q9NYV7 291 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 TAS2R5Q9NYW4 299 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 CRIM1Q9NZV1 1036 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 UPB1Q9UBR1 384 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 HIF3AQ9Y2N7 669 aa9.77□□□□□ -0.85
APTX-209ENST00000460940 MAGED1Q9Y5V3 778 aaPredicted RBP9.77□□□□□ -0.85
APTX-209ENST00000460940 TRBV4-1A0A0J9YWV2 114 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SH3D21A4FU49 640 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ZNF432O94892 652 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 MAKP20794 623 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SSTR2P30874 369 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SOX6P35712 828 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 CBX5P45973 191 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SELENOPP49908 381 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 RPL18Q07020 188 aaKnown RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 ASAH1Q13510 395 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 TBCEQ15813 527 aaPredicted RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 ARMCX4Q5H9R4 360 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ARMC4Q5T2S8 1044 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 TSPO2Q5TGU0 170 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SHEQ5VZ18 495 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 HIST2H2BCQ6DN03 193 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 NHLRC1Q6VVB1 395 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ZNF782Q6ZMW2 699 aaPredicted RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 UTS2BQ765I0 119 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 TMEM123Q8N131 208 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 LINC00471Q8N535 108 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 OR52J3Q8NH60 311 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 OR2M2Q96R28 347 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ACTR6Q9GZN1 396 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 TMEFF2Q9UIK5 374 aaPredicted RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 NBPF19A0A087WUL8 3843 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 A0A1W2PRG6 482 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ZNF587BE7ETH6 402 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 C11orf98E9PRG8 122 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 BLOC1S5-TXNDC5H3BN57 136 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 KRT33AO76009 404 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 IGHV3-9P01782 118 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 EPXP11678 715 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 HLA-DOBP13765 273 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 ATF4P18848 351 aaPredicted RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 FMO3P31513 532 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 TGFBR1P36897 503 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 LIMS1P48059 325 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 DAP3P51398 398 aaKnown RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 HMGA2P52926 109 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 LSM11P83369 360 aaKnown RBP eCLIP9.76□□□□□ -0.85
APTX-209ENST00000460940 TGFBR3Q03167 851 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SEC23BQ15437 767 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 OR2T5Q6IEZ7 315 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 SLC35D2Q76EJ3 337 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 BHLHA15Q7RTS1 189 aaPredicted RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 OAFQ86UD1 273 aa9.76□□□□□ -0.85
APTX-209ENST00000460940 C1orf162Q8NEQ5 155 aaPredicted RBP9.76□□□□□ -0.85
APTX-209ENST00000460940 OR4M2Q8NGB6 313 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms