RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 KLK3P07288 261 aaPredicted RBP10.57□□□□□ -0.72
CPSF3-202ENST00000460593 RNF224P0DH78 156 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 TPT1P13693 172 aaKnown RBP10.57□□□□□ -0.72
CPSF3-202ENST00000460593 ZNF14P17017 642 aaPredicted RBP10.57□□□□□ -0.72
CPSF3-202ENST00000460593 CCR4P51679 360 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 CTXN1P60606 82 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 ADAM8P78325 824 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 PJVKQ0ZLH3 352 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 FHL5Q5TD97 284 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 JAGN1Q8N5M9 183 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 SEMA6DQ8NFY4 1073 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 OR52R1Q8NGF1 315 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 C15orf40Q8WUR7 153 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 RNF141Q8WVD5 230 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 SECTM1Q8WVN6 248 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 ZNF426Q9BUY5 554 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 PAPOLGQ9BWT3 736 aaKnown RBP10.57□□□□□ -0.72
CPSF3-202ENST00000460593 COMMD4Q9H0A8 199 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 PMS2P1A4D2B8 440 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 MOSPD3O75425 235 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 TACSTD2P09758 323 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 CD96P40200 585 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 ACTBP60709 375 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 ACTG1P63261 375 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 IRF4Q15306 451 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 DHCR24Q15392 516 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 ERN2Q76MJ5 926 aaKnown RBP10.57□□□□□ -0.72
CPSF3-202ENST00000460593 ABHD13Q7L211 337 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 LYG2Q86SG7 212 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 MFSD9Q8NBP5 474 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 KREMEN2Q8NCW0 462 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 OR2L8Q8NGY9 312 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 OR51F2Q8NH61 342 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 ZNF417Q8TAU3 575 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 RNF126Q9BV68 326 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 MMP26Q9NRE1 261 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 OR5AC2Q9NZP5 309 aa10.57□□□□□ -0.72
CPSF3-202ENST00000460593 GON4LQ3T8J9 2241 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 WIPF3A6NGB9 483 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 RNASEK-C17orf49H0YIS7 233 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 CTSVO60911 334 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 LRP3O75074 770 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 IGHV2-70P01814 119 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 HLA-DQA2P01906 255 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 ARG1P05089 322 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 SLC9A3R2Q15599 337 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 KLHL26Q53HC5 615 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 DHRS11Q6UWP2 260 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 DPY19L2P2Q6ZN68 376 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 SLC16A9Q7RTY1 509 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.56□□□□□ -0.72
CPSF3-202ENST00000460593 CSNK1A1LQ8N752 337 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 CHST4Q8NCG5 386 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 OR8D1Q8WZ84 308 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 KXD1Q9BQD3 176 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 SYT4Q9H2B2 425 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 OR51M1Q9H341 326 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 FN3KRPQ9HA64 309 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 MRPS33Q9Y291 106 aaKnown RBP10.56□□□□□ -0.72
CPSF3-202ENST00000460593 SLC27A6Q9Y2P4 619 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 COL4A6Q14031 1691 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 CNTRLQ7Z7A1 2325 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 A0A1B0GV50 99 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 C17orf51A8MQB3 221 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 METTL12A8MUP2 240 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 MED6O75586 246 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 PVRP15151 417 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 PSMB6P28072 239 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 PMPCAQ10713 525 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 ELOCQ15369 112 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 ADAM5Q6NVV9 412 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 PAPD4Q6PIY7 484 aaKnown RBP10.56□□□□□ -0.72
CPSF3-202ENST00000460593 ZNF563Q8TA94 476 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 SLC41A2Q96JW4 573 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 RHOVQ96L33 236 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 SLC25A21Q9BQT8 299 aaPredicted RBP10.56□□□□□ -0.72
CPSF3-202ENST00000460593 SLC2A4RGQ9NR83 387 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 LRIT1Q9P2V4 623 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 KLF15Q9UIH9 416 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 DAPP1Q9UN19 280 aa10.56□□□□□ -0.72
CPSF3-202ENST00000460593 MANSC4A6NHS7 340 aaPredicted RBP10.55□□□□□ -0.72
CPSF3-202ENST00000460593 HTR3BO95264 441 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 OR8U8P0C7N1 319 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 CISD3P0C7P0 127 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 MAP3K8P41279 467 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 GPR143P51810 404 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 DEFB103AP81534 67 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 MFGE8Q08431 387 aaPredicted RBP10.55□□□□□ -0.72
CPSF3-202ENST00000460593 EBPQ15125 230 aaKnown RBP10.55□□□□□ -0.72
CPSF3-202ENST00000460593 MEP1BQ16820 701 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 CLEC9AQ6UXN8 241 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 MARCH3Q86UD3 253 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 PARGQ86W56 976 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 CDRT4Q8N9R6 151 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 TMEM229BQ8NBD8 167 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 ZNF524Q96C55 264 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 MRPL38Q96DV4 380 aaKnown RBP10.55□□□□□ -0.72
CPSF3-202ENST00000460593 MRI1Q9BV20 369 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 ELOVL3Q9HB03 270 aa10.55□□□□□ -0.72
CPSF3-202ENST00000460593 SERGEFQ9UGK8 458 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms