RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	COMTD1	Q86VU5	262 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	UEVLD	Q8IX04	471 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	ADPRHL1	Q8NDY3	354 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	OR4F5	Q8NH21	305 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	CCL17	Q92583	94 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	UBE2F	Q969M7	185 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	SLC35B4	Q969S0	331 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	SEPHS2	Q99611	448 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	ARHGDIG	Q99819	225 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	FOXB1	Q99853	325 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	MRI1	Q9BV20	369 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	ULBP2	Q9BZM5	246 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	MMP26	Q9NRE1	261 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	AURKC	Q9UQB9	309 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	CHST2	Q9Y4C5	530 aa		11.14	□□□□□ -0.63
SNHG17-208	ENST00000456953	DHRS12	A0PJE2	317 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	ZNF12	P17014	697 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	HOXC5	Q00444	222 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	KPNB1	Q14974	876 aa	Known RBP	11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	FAM69A	Q5T7M9	428 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	C5orf46	Q6UWT4	87 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	C9orf139	Q6ZV77	190 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	RHOU	Q7L0Q8	258 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	KIR3DL3	Q8N743	410 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	FAM86B1	Q8N7N1	296 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	CPEB3	Q8NE35	698 aa	Known RBP	11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	SLC30A7	Q8NEW0	376 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	TAAR8	Q969N4	342 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	SLC47A1	Q96FL8	570 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	RPS6KB2	Q9UBS0	482 aa		11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	FAM32A	Q9Y421	112 aa	Known RBP	11.13	□□□□□ -0.63
SNHG17-208	ENST00000456953	TCRBV5S2	A0A599	114 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	TRAPPC2L	H3BP13	241 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	ENTPD5	O75356	428 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	IGHV3-13	P01766	116 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	LCK	P06239	509 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	UMPS	P11172	480 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	MAK	P20794	623 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	GRPR	P30550	384 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	IFNA8	P32881	189 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	ZNF81	P51508	661 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	RAG2	P55895	527 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	PIWIL3	Q7Z3Z3	882 aa	Known RBP	11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	CYP4Z1	Q86W10	505 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	C10orf67	Q8IYJ2	551 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	OR6T1	Q8NGN1	323 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	OR6N1	Q8NGY5	312 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	GTF3A	Q92664	365 aa	Known RBP	11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	SLC38A4	Q969I6	547 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	MCHR1	Q99705	422 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	RBM4B	Q9BQ04	359 aa	Known RBP	11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	EMC6	Q9BV81	110 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	BCL2L14	Q9BZR8	327 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	C1orf198	Q9H425	327 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	MAGIX	Q9H6Y5	334 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	TMEM27	Q9HBJ8	222 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	CDH20	Q9HBT6	801 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	SELENON	Q9NZV5	590 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	INSIG2	Q9Y5U4	225 aa		11.12	□□□□□ -0.63
SNHG17-208	ENST00000456953	TRAV36DV7	A0A075B6V5	113 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	TCRBV3S1	A0A5B6	114 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	MS4A18	H0YCH9	400 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	FMO6P	O60774	539 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	SNAP29	O95721	258 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	HPR	P00739	348 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	FABP3	P05413	133 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	PATE4	P0C8F1	98 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	OR8G3P	P0DMU2	310 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	HLA-DOB	P13765	273 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	HOXB6	P17509	224 aa	Known RBP	11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	UCP2	P55851	309 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	TAS2R41	P59536	307 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	ACTR3	P61158	418 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	ERVS71-1	P61550	626 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	PMS2P3	Q13401	168 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	MS4A18	Q3C1V0	323 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	OLFML2A	Q68BL7	652 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	C1QL4	Q86Z23	238 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	RBM45	Q8IUH3	476 aa	Known RBP	11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	SKA3	Q8IX90	412 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	ADGRG5	Q8IZF4	528 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	OR4D11	Q8NGI4	311 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	OR52E2	Q8NGJ4	325 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	CANT1	Q8WVQ1	401 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	WFDC6	Q9BQY6	131 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	EGLN1	Q9GZT9	426 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	OR51B6	Q9H340	312 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	YY1AP1	Q9H869	796 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953	C12orf10	Q9HB07	376 aa		11.11	□□□□□ -0.63
SNHG17-208	ENST00000456953		A0A087WUJ7	227 aa		11.1	□□□□□ -0.63
SNHG17-208	ENST00000456953	FAM181B	A6NEQ2	426 aa		11.1	□□□□□ -0.63
SNHG17-208	ENST00000456953	CPSF4L	A6NMK7	179 aa	Known RBP	11.1	□□□□□ -0.63
SNHG17-208	ENST00000456953	ZNF726	A6NNF4	738 aa		11.1	□□□□□ -0.63
SNHG17-208	ENST00000456953	SPRY3	O43610	288 aa		11.1	□□□□□ -0.63
SNHG17-208	ENST00000456953	NDUFA7	O95182	113 aa		11.1	□□□□□ -0.63
SNHG17-208	ENST00000456953	GPANK1	O95872	356 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms