RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
USP39-207ENST00000450066 IGKV3D-15A0A087WSY6 115 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 TRGV5A0A0B4J1U4 118 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 SHISA3A0PJX4 238 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 CLDN25C9JDP6 229 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 CDAP32320 146 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 RIDAP52758 137 aaKnown RBP12.63□□□□□ -0.39
USP39-207ENST00000450066 HNRNPA0Q13151 305 aaKnown RBP12.63□□□□□ -0.39
USP39-207ENST00000450066 ZMAT1Q5H9K5 638 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 PHYHD1Q5SRE7 291 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 IGFL3Q6UXB1 125 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 OR13C5Q8NGS8 318 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 OR5AK2Q8NH90 309 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 RNF133Q8WVZ7 376 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 PHYHIPQ92561 330 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 POLE4Q9NR33 117 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 LRP12Q9Y561 859 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 LIPGQ9Y5X9 500 aa12.63□□□□□ -0.39
USP39-207ENST00000450066 IQCMA0A1B0GVH7 501 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 SLC43A1O75387 559 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 SYNGR4O95473 234 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 S100A5P33763 92 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 NTF4P34130 210 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 GUCA1AP43080 201 aaPredicted RBP12.62□□□□□ -0.39
USP39-207ENST00000450066 CCR9P51686 369 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 UNQ9370/PRO34162Q6UXP9 181 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 FOXL2NBQ6ZUU3 175 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 SPATC1Q76KD6 591 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 AAED1Q7RTV5 226 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 ZADH2Q8N4Q0 377 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 ABHD3Q8WU67 409 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 ZNF775Q96BV0 537 aaPredicted RBP12.62□□□□□ -0.39
USP39-207ENST00000450066 DCBLD2Q96PD2 775 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 KCNS3Q9BQ31 491 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 WDR12Q9GZL7 423 aaKnown RBP12.62□□□□□ -0.39
USP39-207ENST00000450066 PLEKHB1Q9UF11 243 aaPredicted RBP12.62□□□□□ -0.39
USP39-207ENST00000450066 MCTS1Q9ULC4 181 aaKnown RBP12.62□□□□□ -0.39
USP39-207ENST00000450066 MSRB2Q9Y3D2 182 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 LHFPL6Q9Y693 200 aa12.62□□□□□ -0.39
USP39-207ENST00000450066 TMEM212A6NML5 194 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 OR4C45A6NMZ5 311 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 GPR171O14626 319 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 TFECO14948 347 aaPredicted RBP12.61□□□□□ -0.39
USP39-207ENST00000450066 DHHO43323 396 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 ARL6IP5O75915 188 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 WNT11O96014 354 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 UCHL1P09936 223 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 CPN1P15169 458 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 ZNF24P17028 368 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 MYL9P24844 172 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 LSM6P62312 80 aaKnown RBP12.61□□□□□ -0.39
USP39-207ENST00000450066 PMP22Q01453 160 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 ZNF846Q147U1 533 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 FAM27D1Q5T7N8 215 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 OR7E24Q6IFN5 339 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 RHOUQ7L0Q8 258 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 TPRA1Q86W33 373 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 PRSS35Q8N3Z0 413 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 MFSD4AQ8N468 514 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 BORCS5Q969J3 196 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 TMEM45BQ96B21 275 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 C4orf45Q96LM5 186 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 ULBP2Q9BZM5 246 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 C1orf198Q9H425 327 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 EXO5Q9H790 373 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 EMC7Q9NPA0 242 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 TRAV1-2A0A0B4J238 106 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 IGHG3P01860 377 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 BMP4P12644 408 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 ZNF544Q6NX49 715 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 OR2AJ1Q8NGZ0 328 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 RGP1Q92546 391 aaPredicted RBP12.61□□□□□ -0.39
USP39-207ENST00000450066 AP3S1Q92572 193 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 SLAMF6Q96DU3 332 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 OR14A2Q96R54 314 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 COMMD4Q9H0A8 199 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 NELFAQ9H3P2 528 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 POLR1DQ9Y2S0 133 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 PCDHGA9Q9Y5G4 932 aaKnown RBP12.61□□□□□ -0.39
USP39-207ENST00000450066 DMXL2Q8TDJ6 3036 aa12.61□□□□□ -0.39
USP39-207ENST00000450066 A0A1B0GTH9 108 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 ZNF879B4DU55 563 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 MSR1P21757 451 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 ZNF84P51523 738 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 WDR38Q5JTN6 314 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 WDYHV1Q96HA8 205 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 RBM24Q9BX46 236 aaKnown RBP12.6□□□□□ -0.39
USP39-207ENST00000450066 SMURF1Q9HCE7 757 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 EMC3Q9P0I2 261 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 SPRR3Q9UBC9 169 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 ASH2LQ9UBL3 628 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 GDF2Q9UK05 429 aaPredicted RBP12.6□□□□□ -0.39
USP39-207ENST00000450066 CACNA1CQ13936 2221 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 ZNF407Q9C0G0 2248 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 A0A087WV48 116 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 SMIM30A4D0T7 59 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 CTDSP2O14595 271 aa12.6□□□□□ -0.39
USP39-207ENST00000450066 SRSF10O75494 262 aaKnown RBP12.6□□□□□ -0.39
USP39-207ENST00000450066 PNPP00491 289 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms