RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ZCCHC4Q9H5U6 513 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 TIGARQ9NQ88 270 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 V9GYH0 126 aa9.42□□□□□ -0.9
VIPAS39-203ENST00000448935 KIAA1549Q9HCM3 1950 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 DOCK10Q96BY6 2186 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 TRBV5-5A0A0J9YX44 114 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 OR4C45A6NMZ5 311 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 GPR171O14626 319 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 DVL2O14641 736 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 TRAPPC6AO75865 159 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 LIPCP11150 499 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 CEACAM1P13688 526 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 SRMP19623 302 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 ENPP1P22413 925 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 APEX1P27695 318 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 DCTDP32321 178 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 RPS27P42677 84 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 EVX1P49640 407 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 B3GALT5-AS1P59052 145 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 CAMK2DQ13557 499 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 HIST3H3Q16695 136 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 FAM27D1Q5T7N8 215 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 STEAP3Q658P3 488 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 SLC25A47Q6Q0C1 308 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 LRRN1Q6UXK5 716 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 CREB3L2Q70SY1 520 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 RHOUQ7L0Q8 258 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 OR8H2Q8N162 312 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 POC5Q8NA72 575 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 OR2M7Q8NG81 312 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 OR13C5Q8NGS8 318 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 PPP1R14BQ96C90 147 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 CMTM3Q96MX0 182 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 FOXN4Q96NZ1 517 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 DERL3Q96Q80 235 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 SRRQ9GZT4 340 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 PPIL3Q9H2H8 161 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 C1orf198Q9H425 327 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 CCDC86Q9H6F5 360 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 TCF7L1Q9HCS4 588 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 NOX4Q9NPH5 578 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 RABL2AQ9UBK7 228 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 RABL2BQ9UNT1 228 aa9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 KLF13Q9Y2Y9 288 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-203ENST00000448935 A0A0G2JMM0 328 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 A0A0J9YW62 118 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 A0A1W2PPB8 328 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 A0A1W2PPL8 197 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 A0A1W2PRS3 328 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 KIR3DP1A8MWS1 328 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 FAM25AB3EWG3 89 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 FAM25CB3EWG5 89 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 FAM25GB3EWG6 89 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 TNFSF11O14788 317 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 HPGDSO60760 199 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 PFDN1O60925 122 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 NEURL1O76050 574 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 H2BFMP0C1H6 154 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 POU3F2P20265 443 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 CLDN17P56750 224 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 SOX8P57073 446 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 CARD18P57730 90 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 SCN1BQ07699 218 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 RIN1Q13671 783 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 OR1C1Q15619 314 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 KCNMB1Q16558 191 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 KLHL24Q6TFL4 600 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 DCXRQ7Z4W1 244 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 YRDCQ86U90 279 aaKnown RBP9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 SLC22A16Q86VW1 577 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 GALNT16Q8N428 558 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 OR9K2Q8NGE7 335 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 OR6N1Q8NGY5 312 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 OR2AJ1Q8NGZ0 328 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 ADAMTS14Q8WXS8 1223 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 C11orf40Q8WZ69 217 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 AMELYQ99218 206 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 NIPAL2Q9H841 368 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 DEPPQ9NTK1 212 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 GLTPQ9NZD2 209 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 POLR1DQ9Y2S0 133 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 LRP12Q9Y561 859 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 R4GMQ9 66 aa9.4□□□□□ -0.9
VIPAS39-203ENST00000448935 VPS13AQ96RL7 3174 aa9.4□□□□□ -0.91
VIPAS39-203ENST00000448935 WDR87Q6ZQQ6 2873 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 A0A0G2JK05 382 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 TRABD2BA6NFA1 517 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF814B7Z6K7 855 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 KLRC4-KLRK1H3BQV0 150 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 MPZL1O95297 269 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 WDPCPO95876 746 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 HPNP05981 417 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 CD2P06729 351 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 QDPRP09417 244 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 FREM3P0C091 2139 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 EPXP11678 715 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 CSNK1A1P48729 337 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms