RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 FGFBP3Q8TAT2 258 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 IGFBPL1Q8WX77 278 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 NABP1Q96AH0 204 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 PLEKHA8Q96JA3 519 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 RADILQ96JH8 1075 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 ERMAPQ96PL5 475 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-207ENST00000447641 SNX18Q96RF0 628 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 DDOQ99489 341 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 PLA2G12AQ9BZM1 189 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 EGLN3Q9H6Z9 239 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 TBC1D23Q9NUY8 699 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 CLN6Q9NWW5 311 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 PLEKHA6Q9Y2H5 1048 aa12.29□□□□□ -0.44
SREBF1-207ENST00000447641 RTTNQ86VV8 2226 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 A0A087WXM4 84 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 IRGMA1A4Y4 181 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 M0R1B8 84 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 XKRYO14609 159 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 ABCD4O14678 606 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 HS3ST1O14792 307 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 HLA-HP01893 362 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 CCDC159P0C7I6 412 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 NPR2P20594 1047 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 ARR3P36575 388 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 GABARAPL2P60520 117 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 PTGES3Q15185 160 aaKnown RBP12.28□□□□□ -0.44
SREBF1-207ENST00000447641 ZNF672Q499Z4 452 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-207ENST00000447641 FAM27BQ5VT28 67 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 MEDAGQ5VYS4 303 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 PAMR1Q6UXH9 720 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 DPPA2Q7Z7J5 298 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 MDP1Q86V88 176 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 LNX2Q8N448 690 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 OR2T33Q8NG76 320 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 OR8J1Q8NGP2 316 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 FAM81AQ8TBF8 368 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 SH3GL3Q99963 347 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 IFT27Q9BW83 186 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 SIAEQ9HAT2 523 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 NOX3Q9HBY0 568 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 SLC25A19Q9HC21 320 aa12.28□□□□□ -0.44
SREBF1-207ENST00000447641 H7C1C5 153 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 ATE1O95260 518 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 IFNGP01579 166 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 IGFBP1P08833 259 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-207ENST00000447641 MMP7P09237 267 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-207ENST00000447641 CECR9P0C854 216 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 HIST1H1CP16403 213 aaKnown RBP12.27□□□□□ -0.45
SREBF1-207ENST00000447641 CTLA4P16410 223 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 ZNF14P17017 642 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-207ENST00000447641 CDAP32320 146 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 GIPRP48546 466 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 LCN6P62502 163 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 ETFDHQ16134 617 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 GSG1Q2KHT4 349 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 SLX4IPQ5VYV7 408 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 MYPOPQ86VE0 399 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-207ENST00000447641 KRTAP1-3Q8IUG1 177 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 ZNF611Q8N823 705 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 NPEPL1Q8NDH3 523 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 IPCEF1Q8WWN9 437 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-207ENST00000447641 NSMAFQ92636 917 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 AKAP1Q92667 903 aaKnown RBP eCLIP12.27□□□□□ -0.45
SREBF1-207ENST00000447641 MBD6Q96DN6 1003 aa12.27□□□□□ -0.45
SREBF1-207ENST00000447641 MRPS26Q9BYN8 205 aaKnown RBP12.27□□□□□ -0.45
SREBF1-207ENST00000447641 UBL3O95164 117 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 FARS2O95363 451 aaKnown RBP12.26□□□□□ -0.45
SREBF1-207ENST00000447641 RAF1P04049 648 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 SCG5P05408 212 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 CELA3BP08861 270 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 GNAO1P09471 354 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 CD79AP11912 226 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 CD53P19397 219 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 ISL1P61371 349 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 SNRPGP62308 76 aaKnown RBP12.26□□□□□ -0.45
SREBF1-207ENST00000447641 RAB1AP62820 205 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 NAAAQ02083 359 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 PIGFQ07326 219 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 SPOCK1Q08629 439 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 C6orf141Q5SZD1 244 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 C20orf204Q6ZNR8 217 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 Q71RC1 249 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-207ENST00000447641 WFDC11Q8NEX6 87 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 IL17RDQ8NFM7 739 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 KBTBD8Q8NFY9 601 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 TSPAN14Q8NG11 270 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 NANOS1Q8WY41 292 aaKnown RBP12.26□□□□□ -0.45
SREBF1-207ENST00000447641 HTRA1Q92743 480 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 NEUROG1Q92886 237 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 RFKQ969G6 155 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 SYT4Q9H2B2 425 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 SEC61A2Q9H9S3 476 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 UBAP1Q9NZ09 502 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 EDARQ9UNE0 448 aa12.26□□□□□ -0.45
SREBF1-207ENST00000447641 IGLV1-36A0A0B4J1U3 117 aa12.25□□□□□ -0.45
SREBF1-207ENST00000447641 OR6C68A6NDL8 312 aa12.25□□□□□ -0.45
SREBF1-207ENST00000447641 E7EQL1 145 aa12.25□□□□□ -0.45
SREBF1-207ENST00000447641 E9PQ18 207 aa12.25□□□□□ -0.45
SREBF1-207ENST00000447641 DCTN6O00399 190 aa12.25□□□□□ -0.45
SREBF1-207ENST00000447641 SERPINA5P05154 406 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms