RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
USE1-202ENST00000445667 NDUFS8O00217 210 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 KHDRBS3O75525 346 aaKnown RBP12.65□□□□□ -0.38
USE1-202ENST00000445667 STAMBPO95630 424 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 TXNDC12O95881 172 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 NAT2P11245 290 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 ZNF250P15622 560 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 FPR3P25089 353 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 IFNGR2P38484 337 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 WNT5AP41221 380 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 GSSP48637 474 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 HMGA2P52926 109 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 PCBD1P61457 104 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 DBPQ10586 325 aaPredicted RBP12.65□□□□□ -0.38
USE1-202ENST00000445667 PPP1R8Q12972 351 aaKnown RBP12.65□□□□□ -0.38
USE1-202ENST00000445667 MTX3Q5HYI7 312 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 LCN8Q6JVE9 175 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 C1orf94Q6P1W5 598 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 ALDH16A1Q8IZ83 802 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 ZNF101Q8IZC7 436 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 BCAS4Q8TDM0 211 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 UBASH3BQ8TF42 649 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 C11orf40Q8WZ69 217 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 TSSK2Q96PF2 358 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 BCL2L14Q9BZR8 327 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 BPESC1Q9GZL8 116 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 NUAK2Q9H093 628 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
USE1-202ENST00000445667 LYVE1Q9Y5Y7 322 aa12.65□□□□□ -0.38
USE1-202ENST00000445667 IGHV4-61A0A0C4DH41 118 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 TNFRSF11BO00300 401 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 KRT36O76013 467 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 GPANK1O95872 356 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 SLC6A6P31641 620 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 MAGEA2P43356 314 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 CENPAP49450 140 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 KLF3P57682 345 aaPredicted RBP12.64□□□□□ -0.39
USE1-202ENST00000445667 SELENOVP59797 346 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 TSPAN31Q12999 210 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 NKPD1Q17RQ9 610 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 SPATA46Q5T0L3 261 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 PGBD2Q6P3X8 592 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 LEG1Q6P5S2 330 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 TRPM8Q7Z2W7 1104 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 SYT9Q86SS6 491 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 ADCK1Q86TW2 530 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 GLB1L2Q8IW92 636 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 ZNF786Q8N393 782 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 OR9Q2Q8NGE9 314 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 CCDC124Q96CT7 223 aaKnown RBP12.64□□□□□ -0.39
USE1-202ENST00000445667 THTPAQ9BU02 230 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 IFT27Q9BW83 186 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 C1orf21Q9H246 121 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 MUC13Q9H3R2 512 aa12.64□□□□□ -0.39
USE1-202ENST00000445667 EIF3KQ9UBQ5 218 aaKnown RBP12.64□□□□□ -0.39
USE1-202ENST00000445667 PRPF19Q9UMS4 504 aaKnown RBP12.64□□□□□ -0.39
USE1-202ENST00000445667 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 DCTN6O00399 190 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 TLX2O43763 284 aaPredicted RBP12.63□□□□□ -0.39
USE1-202ENST00000445667 UBOX5O94941 541 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 NGFP01138 241 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 HPXP02790 462 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 IGHV4-31P0DP07 118 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 APEHP13798 732 aaKnown RBP12.63□□□□□ -0.39
USE1-202ENST00000445667 HIST1H1CP16403 213 aaKnown RBP12.63□□□□□ -0.39
USE1-202ENST00000445667 COL8A2P25067 703 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 GLO1Q04760 184 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 KRTAP21-3Q3LHN1 58 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 ELFN2Q5R3F8 820 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.63□□□□□ -0.39
USE1-202ENST00000445667 OR4C15Q8NGM1 316 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 OR4K13Q8NH42 304 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 ABHD4Q8TB40 342 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 SLC25A40Q8TBP6 338 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 GTF3AQ92664 365 aaKnown RBP12.63□□□□□ -0.39
USE1-202ENST00000445667 NMNAT3Q96T66 252 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 BTBD10Q9BSF8 475 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 MAGIXQ9H6Y5 334 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 EGLN3Q9H6Z9 239 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 SRA1Q9HD15 236 aaKnown RBP12.63□□□□□ -0.39
USE1-202ENST00000445667 VNN3Q9NY84 501 aa12.63□□□□□ -0.39
USE1-202ENST00000445667 ANK3Q12955 4377 aaKnown RBP12.63□□□□□ -0.39
USE1-202ENST00000445667 NSD1Q96L73 2696 aaPredicted RBP12.63□□□□□ -0.39
USE1-202ENST00000445667 RTTNQ86VV8 2226 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 ACOT8O14734 319 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 ARPC3O15145 178 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 DOK2O60496 412 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 CRLF1O75462 422 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 NCR1O76036 304 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 GASTP01350 101 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 GIFP27352 417 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 NOS3P29474 1203 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 MPV17P39210 176 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 MAGEB1P43366 347 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 SCRN3Q0VDG4 424 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 MEP1BQ16820 701 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 ZNF718Q3SXZ3 478 aa12.62□□□□□ -0.39
USE1-202ENST00000445667 FAM98BQ52LJ0 330 aaKnown RBP12.62□□□□□ -0.39
USE1-202ENST00000445667 TMEM255AQ5JRV8 349 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms