RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ACBD4Q8NC06 268 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 TSTD1Q8NFU3 115 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 CMBLQ96DG6 245 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 EMC6Q9BV81 110 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 WWTR1Q9GZV5 400 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 CTSFQ9UBX1 484 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 MRTO4Q9UKD2 239 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 SPAG17Q6Q759 2223 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 THADAQ6YHU6 1953 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 IGKV1D-43A0A0B4J1Z2 117 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 BLACEA4D250 179 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 TMEM235A6NFC5 223 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 SNRPGP15A8MWD9 76 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 F5H5P2 479 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF432O94892 652 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 IL5P05113 134 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 CSF1P09603 554 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 PGCP20142 388 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 S100A11P31949 105 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 GKN2Q86XP6 184 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 RNF128Q8TEB7 428 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 MICU1Q9BPX6 476 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 MS4A7Q9GZW8 240 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 RABL2AQ9UBK7 228 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 RABL2BQ9UNT1 228 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 IGLV1-36A0A0B4J1U3 117 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 SIGLEC5O15389 551 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 IGF2P01344 180 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 AMY2AP04746 511 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 NME1P15531 152 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 HTR2CP28335 458 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 CSNK1EP49674 416 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 RIDAP52758 137 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 SIGLEC14Q08ET2 396 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 SGCBQ16585 318 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 LIN54Q6MZP7 749 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 DCXRQ7Z4W1 244 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 GABRG1Q8N1C3 465 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 CLEC1AQ8NC01 280 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 OR13C3Q8NGS6 347 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 C8orf44Q96CB5 159 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 SEH1LQ96EE3 360 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 NUDT22Q9BRQ3 303 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 PELOQ9BRX2 385 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 SDHAF2Q9NX18 166 aa12.17□□□□□ -0.46
HERPUD1-204ENST00000439977 MUC3AQ02505 3323 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 WDFY4Q6ZS81 3184 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ASCC3Q8N3C0 2202 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 IGKV3D-11A0A0A0MRZ8 115 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 B8ZZF3 427 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 H3BML4 177 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 TSPAN4O14817 238 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 NUPL2O15504 423 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF354AO60765 605 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 RAB3DO95716 219 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC6A8P48029 635 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 CFHR1Q03591 330 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ZMYND11Q15326 602 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ELAVL1Q15717 326 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC22A6Q4U2R8 563 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 TSSK4Q6SA08 328 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 RELL2Q8NC24 303 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 OR6N1Q8NGY5 312 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF519Q8TB69 540 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 PNPLA2Q96AD5 504 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 CCNL2Q96S94 520 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 VN1R1Q9GZP7 353 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 CKLFQ9UBR5 152 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 COPS7AQ9UBW8 275 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 IGHV1OR15-9A0A0B4J2B8 117 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ALG1L2C9J202 215 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 P2RY10O00398 339 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 CCSO14618 274 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 TSPAN2O60636 221 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 LPLP06858 475 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 NMBP08949 121 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 DNASE1L1P49184 302 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ATXN7L3Q14CW9 347 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 OR7A5Q15622 319 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 TUSC1Q2TAM9 212 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 BEX5Q5H9J7 111 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 COL13A1Q5TAT6 717 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 DNM1P46Q6ZS02 220 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC29A4Q7RTT9 530 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 RTN4RL2Q86UN3 420 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 SMRP1Q8NCR6 262 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 C15orf40Q8WUR7 153 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ZDHHC12Q96GR4 267 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 SEC22AQ96IW7 307 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 CYYR1Q96J86 154 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 TXNIPQ9H3M7 391 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF304Q9HCX3 659 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 APMAPQ9HDC9 416 aa12.16□□□□□ -0.46
HERPUD1-204ENST00000439977 RTTNQ86VV8 2226 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 PLPP3O14495 311 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 CD2P06729 351 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 CSF2RBP32927 897 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 FBXW4P57775 412 aa12.15□□□□□ -0.46
HERPUD1-204ENST00000439977 NR0B2Q15466 257 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms