RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 AHDC1Q5TGY3 1603 aaPredicted RBP15.69■□□□□ 0.1
PTPRF-209ENST00000438120 HOXD12P35452 270 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 DEFB109BQ30KR1 87 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 OR2B11Q5JQS5 317 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 RHOUQ7L0Q8 258 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 LOXL2Q9Y4K0 774 aa15.69■□□□□ 0.1
PTPRF-209ENST00000438120 FAM221AA4D161 298 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 C5orf49A4QMS7 147 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 FAM157BP0CG42 384 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 EMDP50402 254 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 GNB1P62873 340 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 USP51Q70EK9 711 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 SLC35G3Q8N808 338 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 SLC25A43Q8WUT9 341 aaPredicted RBP15.68■□□□□ 0.1
PTPRF-209ENST00000438120 KIRREL1Q96J84 757 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 CTSFQ9UBX1 484 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 MGST1P10620 155 aaKnown RBP15.68■□□□□ 0.1
PTPRF-209ENST00000438120 AADACP22760 399 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 CTU2Q2VPK5 515 aaKnown RBP15.68■□□□□ 0.1
PTPRF-209ENST00000438120 SYT6Q5T7P8 510 aaPredicted RBP15.68■□□□□ 0.1
PTPRF-209ENST00000438120 GABARAPH6UMI1 98 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 TNFSF15O95150 251 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 GABARAPO95166 117 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 SPI1P17947 270 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 TBXA2RP21731 343 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 TMEM196Q5HYL7 178 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 C11orf40Q8WZ69 217 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 IGLV3-27P01718 113 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 EIF4EP06730 217 aaKnown RBP15.68■□□□□ 0.1
PTPRF-209ENST00000438120 TLE4Q04727 773 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 KHDC1LQ5JSQ8 128 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 SSX9Q7RTT3 188 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 OR51F2Q8NH61 342 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 OR10J5Q8NHC4 309 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 PLK3Q9H4B4 646 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 SIRPB1O00241 398 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 TNFSF11O14788 317 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 ACVR1Q04771 509 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 DOK3Q7L591 496 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 FBXL6Q8N531 539 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 GON7Q9BXV9 100 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 SLC22A11Q9NSA0 550 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 ING1Q9UK53 422 aaPredicted RBP15.68■□□□□ 0.1
PTPRF-209ENST00000438120 RGPD1P0DJD0 1748 aa15.68■□□□□ 0.1
PTPRF-209ENST00000438120 PLRG1O43660 514 aaKnown RBP15.67■□□□□ 0.1
PTPRF-209ENST00000438120 AARDQ4LEZ3 155 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 SVBPQ8N300 66 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 OR5H6Q8NGV6 325 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 CCDC74BQ96LY2 380 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 C4AP0C0L4 1744 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 AGAP14A8MT82 685 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 E9PI62 339 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 CAPZBP47756 277 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 RPL18Q07020 188 aaKnown RBP15.67■□□□□ 0.1
PTPRF-209ENST00000438120 DMWDQ09019 674 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 Q6ZS52 159 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 INTS12Q96CB8 462 aaKnown RBP15.67■□□□□ 0.1
PTPRF-209ENST00000438120 IKZF5Q9H5V7 419 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 UGT2A1Q9Y4X1 527 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 IGLV3-25P01717 112 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 TGFBR1P36897 503 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 GABRA4P48169 554 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 GSK3AP49840 483 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 ZNF133P52736 654 aaPredicted RBP15.67■□□□□ 0.1
PTPRF-209ENST00000438120 METAP1P53582 386 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 ELLP55199 621 aaPredicted RBP15.67■□□□□ 0.1
PTPRF-209ENST00000438120 S100A7AQ86SG5 101 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 LYSMD1Q96S90 227 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 ATP23Q9Y6H3 246 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 CXCL13O43927 109 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 OR8U8P0C7N1 319 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 ZDHHC11BP0C7U3 371 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 ELK1P19419 428 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 PCSK6P29122 969 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 DHRS4L2Q6PKH6 230 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 NLRP8Q86W28 1048 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 RTL8AQ9BWD3 113 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 H0Y8G0 127 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 M0R1B8 84 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 CSF3P09919 207 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 SRFP11831 508 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 GPR119Q8TDV5 335 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 PPP1R3CQ9UQK1 317 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 CNTRLQ7Z7A1 2325 aa15.67■□□□□ 0.1
PTPRF-209ENST00000438120 OIP5O43482 229 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 ISL1P61371 349 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 SLC30A7Q8NEW0 376 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 EXO1Q9UQ84 846 aaKnown RBP15.66■□□□□ 0.1
PTPRF-209ENST00000438120 A0A1W2PPC4 97 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 UPK1AO00322 258 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 BSGP35613 385 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 RBP2P50120 134 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 ZNF620Q6ZNG0 422 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 WFDC8Q8IUA0 241 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 SHARPINQ9H0F6 387 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 SDHAP31040 664 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPRF-209ENST00000438120 LYSMD2Q8IV50 215 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 RDH5Q92781 318 aa15.66■□□□□ 0.1
PTPRF-209ENST00000438120 PKMYT1Q99640 499 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms