RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 FUT3P21217 361 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 ATP6V1B2P21281 511 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 GDI1P31150 447 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 OTX1P32242 354 aaPredicted RBP3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 TNNT2P45379 298 aaPredicted RBP3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 BEX3Q00994 111 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 SLC39A6Q13433 755 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 NRF1Q16656 503 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 ARMC12Q5T9G4 340 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 COX15Q7KZN9 410 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 ZNF571Q7Z3V5 609 aaPredicted RBP3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 MFSD6LQ8IWD5 586 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 PNKDQ8N490 385 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 OR7G2Q8NG99 324 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 PIBF1Q8WXW3 757 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 STMN2Q93045 179 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 MARC2Q969Z3 335 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 ZBED3Q96IU2 234 aaPredicted RBP3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 SORT1Q99523 831 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 GPR61Q9BZJ8 451 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 RACGAP1Q9H0H5 632 aa3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 MRPL47Q9HD33 250 aaKnown RBP3.53□□□□□ -1.84
PTP4A1P3-201ENST00000433661 TICRRQ7Z2Z1 1910 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ITPR2Q14571 2701 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 COL11A1P12107 1806 aaPredicted RBP3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ACACAQ13085 2346 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 A0A0G2JN53 185 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 HEATR9A2RTY3 570 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 USP27XA6NNY8 438 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CCL21O00585 134 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 MGRN1O60291 552 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 AGTP01019 485 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 KRT14P02533 472 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TROVE2P10155 538 aaKnown RBP eCLIP3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TCN1P20061 433 aaPredicted RBP3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 IFNA8P32881 189 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CTRLP40313 264 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 UGT2B15P54855 530 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 RPS8P62241 208 aaKnown RBP3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 PSG7Q13046 419 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 HERPUD1Q15011 391 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 RNASEKQ6P5S7 137 aaKnown RBP3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TRIM40Q6P9F5 258 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 Q6ZN92 141 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TTC5Q8N0Z6 440 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 OTUD6BQ8N6M0 293 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ZNF557Q8N988 423 aaPredicted RBP3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SUMF2Q8NBJ7 301 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ZNF740Q8NDX6 193 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SDR9C7Q8NEX9 313 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SPATA4Q8NEY3 305 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 NPBQ8NG41 125 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CYYR1Q96J86 154 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 OR8B4Q96RC9 309 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 NRTNQ99748 197 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 NUP58Q9BVL2 599 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ACTR6Q9GZN1 396 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SRMSQ9H3Y6 488 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 PLSCR3Q9NRY6 295 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 HOXC10Q9NYD6 342 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CALYQ9NYX4 217 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 STARD10Q9Y365 291 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 COL6A6A6NMZ7 2263 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ARAP2Q8WZ64 1704 aa3.52□□□□□ -1.85
PTP4A1P3-201ENST00000433661 MTORP42345 2549 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SIP14410 1827 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 A0A1B0GUL6 1792 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 IGLV3-22A0A075B6J6 115 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 LOC730098B7Z3J9 87 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SOX15O60248 233 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 WBP4O75554 376 aaKnown RBP3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 P04436 131 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 DUX4L4P0CJ87 422 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CRISP2P16562 243 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 VDAC2P45880 294 aaPredicted RBP3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 KRTAP10-3P60369 221 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SRSF5Q13243 272 aaKnown RBP3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 PPP1R7Q15435 360 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 XKR7Q5GH72 579 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 GPR157Q5UAW9 335 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CERS6Q6ZMG9 384 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ZNF620Q6ZNG0 422 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SH2D6Q7Z4S9 175 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ACOT4Q8N9L9 421 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 OR9G1Q8NH87 305 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 FAM151AQ8WW52 585 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 MYDGFQ969H8 173 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ELSPBP1Q96BH3 223 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 MS4A4EQ96PG1 132 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TGS1Q96RS0 853 aaKnown RBP3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 PELOQ9BRX2 385 aaKnown RBP3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ROGDIQ9GZN7 287 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 PDFQ9HBH1 243 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CCL28Q9NRJ3 127 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 PSMC3IPQ9P2W1 217 aaPredicted RBP3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 MTRF1LQ9UGC7 380 aaKnown RBP3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TRAF3IP3Q9Y228 551 aa3.51□□□□□ -1.85
PTP4A1P3-201ENST00000433661 NBEAL1Q6ZS30 2694 aa3.5□□□□□ -1.85
PTP4A1P3-201ENST00000433661 FN1P02751 2386 aaKnown RBP3.5□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CTAGE15A4D2H0 777 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms