RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 GSX1Q9H4S2 264 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 CXorf56Q9H5V9 222 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 CDH20Q9HBT6 801 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 CBLN4Q9NTU7 201 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 TBC1D23Q9NUY8 699 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 DUSP13Q9UII6 198 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ADAM30Q9UKF2 790 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 FZR1Q9UM11 496 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 B9D1Q9UPM9 204 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 PRRC2AP48634 2157 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ASH1LQ9NR48 2969 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 COL12A1Q99715 3063 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SETXQ7Z333 2677 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGHV2OR16-5A0A0B4J2B6 119 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 TCRBV3S1A0A5B6 114 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 C5orf49A4QMS7 147 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR6C68A6NDL8 312 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 TRIM64A6NGJ6 449 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 TRIM64BA6NI03 449 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 NPIPB13A6NJU9 1138 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 NPIPB4C9JG80 1138 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 H3BN98 237 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 OVOL3O00110 214 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 DCTN6O00399 190 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 EBAG9O00559 213 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 GPRIN2O60269 458 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 MGRN1O60291 552 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 CIB2O75838 187 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 LY6HO94772 140 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SOX14O95416 240 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 RENP00797 406 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGHV4-39P01824 125 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 HLA-DQA2P01906 255 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 MMP7P09237 267 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 NR2C1P13056 603 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 CTLA4P16410 223 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 GSTM3P21266 225 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 STOMP27105 288 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 APLNRP35414 380 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ARHGDIAP52565 204 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF133P52736 654 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ERVS71-1P61550 626 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 CCNIQ14094 377 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ENDOGQ14249 297 aaKnown RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ADIPOQQ15848 244 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 MST1LQ2TV78 715 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ALKBH6Q3KRA9 238 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 C1QTNF12Q5T7M4 302 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 C1orf146Q5VVC0 180 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SHEQ5VZ18 495 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 FAM205BPQ63HN1 556 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 GPR139Q6DWJ6 353 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF770Q6IQ21 691 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 CDPF1Q6NVV7 123 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF774Q6NX45 483 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF544Q6NX49 715 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 TMEM154Q6P9G4 183 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SPNS3Q6ZMD2 512 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 Q71RC1 249 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 AMIGO2Q86SJ2 522 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 LRP11Q86VZ4 500 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 KRTAP1-3Q8IUG1 177 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 GLB1L2Q8IW92 636 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR6V1Q8N148 313 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 LRRC75A-AS1Q8N1F1 130 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 CIARTQ8N365 385 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SVOPLQ8N434 492 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 PAQR4Q8N4S7 273 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 FAM169BQ8N8A8 192 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 CYB561A3Q8NBI2 242 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC30A7Q8NEW0 376 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SDR9C7Q8NEX9 313 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 IL17RDQ8NFM7 739 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR4F15Q8NGB8 312 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR52L1Q8NGH7 329 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR51L1Q8NGJ5 315 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR8D4Q8NGM9 314 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 FNDC8Q8TC99 324 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 FBLIM1Q8WUP2 373 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNRF4Q8WWF5 429 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGFBPL1Q8WX77 278 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 C11orf40Q8WZ69 217 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 POP5Q969H6 163 aaKnown RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 OTULINQ96BN8 352 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 CDADC1Q9BWV3 514 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SEMA6AQ9H2E6 1030 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 LRMDAQ9H2I8 198 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 PLK3Q9H4B4 646 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SMURF2Q9HAU4 748 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 RPRD1BQ9NQG5 326 aaKnown RBP4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 POLE4Q9NR33 117 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 CA10Q9NS85 328 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 ARMC1Q9NVT9 282 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 SPEF1Q9Y4P9 236 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 TIMM10BQ9Y5J6 103 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 PMF1-BGLAPU3KQ54 211 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 NBPF19A0A087WUL8 3843 aa4.98□□□□□ -1.61
HMGB3P24-201ENST00000433260 FLNBO75369 2602 aaKnown RBP4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 PDZD2O15018 2839 aa4.97□□□□□ -1.61
HMGB3P24-201ENST00000433260 LOC100509620A0A075B734 347 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms