RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CAV2P51636 162 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF92Q03936 586 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 PSG7Q13046 419 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 ORC2Q13416 577 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 FZD2Q14332 565 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 ARHGAP19Q14CB8 494 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 RCN1Q15293 331 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 SHHQ15465 462 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 HSDL1Q3SXM5 330 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF836Q6ZNA1 936 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 TMEM61Q8N0U2 210 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 PUSL1Q8N0Z8 303 aaKnown RBP2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 PQLC3Q8N755 202 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 LINC01555Q8NAE3 123 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR10G9Q8NGN4 311 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 SLC22A8Q8TCC7 542 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 FAM151AQ8WW52 585 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 DCUN1D4Q92564 292 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 TMEM54Q969K7 222 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 MCUR1Q96AQ8 359 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 PHYHIPLQ96FC7 376 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 HSFY1Q96LI6 401 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 NAP1L5Q96NT1 182 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 CENPKQ9BS16 269 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 NAT9Q9BTE0 207 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 COA1Q9GZY4 146 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 NCOR1P1Q9H4R4 102 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 AUNIPQ9H7T9 357 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 GEMIN7Q9H840 131 aaKnown RBP2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 TMEM165Q9HC07 324 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF160Q9HCG1 818 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 FGF20Q9NP95 211 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 GPATCH2LQ9NWQ4 482 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 TRAF3IP3Q9Y228 551 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 COL1A1P02452 1464 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 CENPFP49454 3210 aa2.12□□□□□ -2.07
HMGB1P27-201ENST00000431429 CCDC88AQ3V6T2 1871 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 LRP4O75096 1905 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 PAPPA2Q9BXP8 1791 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 TRBV9A0A0B4J1U6 114 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 A0A1B0GVI7 797 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 H0YIV9 168 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 DFNA5O60443 496 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 EIF3GO75821 320 aaKnown RBP eCLIP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF17P17021 662 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 TNNI1P19237 187 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 FMO3P31513 532 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 NAA10P41227 235 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 RFX3P48380 749 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 SUB1P53999 127 aaKnown RBP eCLIP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 UGT2B15P54855 530 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 KRTAP10-3P60369 221 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 KRTAP10-7P60409 375 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 RAB10P61026 200 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 MAB21L1Q13394 359 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 TGFBIQ15582 683 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 MRPL23Q16540 153 aaKnown RBP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 SGCAQ16586 387 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 C1orf185Q5T7R7 199 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 C19orf35Q6ZS72 473 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 PRR22Q8IZ63 422 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 HSD17B11Q8NBQ5 300 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR2L5Q8NG80 312 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 KIFAP3Q92845 792 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 MARC2Q969Z3 335 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 MTG1Q9BT17 334 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 ROGDIQ9GZN7 287 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 FAM192AQ9GZU8 254 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 SIAEQ9HAT2 523 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 PLGRKTQ9HBL7 147 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 MRPL47Q9HD33 250 aaKnown RBP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 ANAPC11Q9NYG5 84 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 RABL2AQ9UBK7 228 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 LSM7Q9UK45 103 aaKnown RBP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 CAB39Q9Y376 341 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 SLC25A15Q9Y619 301 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 PIKFYVEQ9Y2I7 2098 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 PHLPP2Q6ZVD8 1323 aa2.11□□□□□ -2.07
HMGB1P27-201ENST00000431429 RTL9Q8NET4 1388 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 LTN1O94822 1766 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 DLEC1Q9Y238 1755 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 ITGB4P16144 1822 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 TRAV39A0A0B4J263 110 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 GOLGA6L7A0A1B0GV03 622 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 CYSRT1A8MQ03 144 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 PEX7O00628 323 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 NDUFAB1O14561 156 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 HAT1O14929 419 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 RAB29O14966 203 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR2J3O76001 311 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 H6PDO95479 791 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 C6orf47O95873 294 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 ANXA8P13928 327 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 RCC1P18754 421 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 FOXN2P32314 431 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 NUDT1P36639 197 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 RBMXP38159 391 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 SYKP43405 635 aa2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 TMED10P49755 219 aaKnown RBP2.1□□□□□ -2.07
HMGB1P27-201ENST00000431429 CRISP3P54108 245 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms