RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CHST8Q9H2A9 424 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 POFUT1Q9H488 388 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 RBM7Q9Y580 266 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 TUBG1P23258 451 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 P2RY2P41231 377 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 CYCSP99999 105 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 UBE3DQ7Z6J8 389 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 SDR9C7Q8NEX9 313 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 HAVCR2Q8TDQ0 301 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 KCNK6Q9Y257 313 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 IGHV2-5P01817 119 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 RAB40ALP0C0E4 278 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 SLC26A5P58743 744 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 UBE2V2Q15819 145 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 IQCJQ1A5X6 159 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 KHDC3LQ587J8 217 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 TCTN3Q6NUS6 607 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 SYT9Q86SS6 491 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 MAML2Q8IZL2 1156 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 HSD17B11Q8NBQ5 300 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 OR10G6Q8NH81 332 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 LCN9Q8WX39 176 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 RAB40AQ8WXH6 277 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 THAP4Q8WY91 577 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 PRDM13Q9H4Q3 707 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 TAAR2Q9P1P5 351 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 A4GNTQ9UNA3 340 aa13.15□□□□□ -0.3
SYNGAP1-203ENST00000428982 H7BY64 318 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 BHLHE40O14503 412 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 AQP7O14520 342 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 NDUFS1P28331 727 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 ZNF345Q14585 488 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 VHLLQ6RSH7 139 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 Q6ZRG5 221 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 MEX3DQ86XN8 651 aaKnown RBP13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 TM4SF18Q96CE8 201 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 VWCEQ96DN2 955 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 PRAP1Q96NZ9 151 aa13.15□□□□□ -0.31
SYNGAP1-203ENST00000428982 FNDC1Q4ZHG4 1894 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 UNC119BA6NIH7 251 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 EREGO14944 169 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 PET100P0DJ07 73 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 RAC2P15153 192 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 SLC25A30Q5SVS4 291 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 JMJD6Q6NYC1 403 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 TMEM64Q6YI46 380 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 CPOQ8IVL8 374 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 SLC30A7Q8NEW0 376 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 OR51Q1Q8NH59 317 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 WDR92Q96MX6 357 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 HDAC8Q9BY41 377 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 EGLN3Q9H6Z9 239 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 BCL2L10Q9HD36 194 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 GSKIPQ9P0R6 139 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 BRCA2P51587 3418 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 TMEM265A0A087WTH1 108 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 SEMA4FO95754 770 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 PLGP00747 810 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 TNFP01375 233 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 ITGA5P08648 1049 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 NPSP0C0P6 89 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 RNH1P13489 461 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 CLDN12P56749 244 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 LSM6P62312 80 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 CCSMST1Q4G0I0 132 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 FRRS1Q6ZNA5 592 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 BEND2Q8NDZ0 799 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 IL17FQ96PD4 163 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 SELENOIQ9C0D9 397 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 A0A0G2JN53 185 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 OPRD1P41143 372 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 IDH3GP51553 393 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 CD200R1LQ6Q8B3 271 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 FAM220AQ7Z4H9 259 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 NUP43Q8NFH3 380 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 M1APQ8TC57 530 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 INTS14Q96SY0 518 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 CDC6Q99741 560 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 GPR174Q9BXC1 333 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 LHX6Q9UPM6 363 aa13.14□□□□□ -0.31
SYNGAP1-203ENST00000428982 K7EPK0 472 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 ZNF217O75362 1048 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 GALP22466 123 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 THBS4P35443 961 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 REEP5Q00765 189 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 PGGHGQ32M88 737 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 ENTPD8Q5MY95 495 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 FAM71E2Q8N5Q1 922 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 C11orf42Q8N5U0 333 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 LPAR3Q9UBY5 353 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 G3V3Q6 166 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 CYB5AP00167 134 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 ERCC1P07992 297 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 ATF1P18846 271 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 IL13RA1P78552 427 aa13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 EBPQ15125 230 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-203ENST00000428982 ARL14Q8N4G2 192 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms