RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 IGHV3-13P01766 116 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 CST2P09228 141 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 COX4I1P13073 169 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 NCK1P16333 377 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 MSR1P21757 451 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 FUT4P22083 530 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 SLC9A3P48764 834 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 CENPAP49450 140 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 SLC7A2P52569 658 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 LMO4P61968 165 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 PPP1CBP62140 327 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 SCGB2A2Q13296 93 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 FAM27BQ5VT28 67 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 FAM205BPQ63HN1 556 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 C1orf94Q6P1W5 598 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 ARL9Q6T311 187 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 RFPL4BQ6ZWI9 263 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 ARPINQ7Z6K5 226 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 PEG10Q86TG7 708 aaKnown RBP10.24□□□□□ -0.77
TTC3-208ENST00000428693 RP9Q8TA86 221 aaKnown RBP10.24□□□□□ -0.77
TTC3-208ENST00000428693 FNDC8Q8TC99 324 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 KLF14Q8TD94 323 aaPredicted RBP10.24□□□□□ -0.77
TTC3-208ENST00000428693 LIPHQ8WWY8 451 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 HSH2DQ96JZ2 352 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 NDEL1Q9GZM8 345 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 RACGAP1Q9H0H5 632 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 WNT5BQ9H1J7 359 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 MSL2Q9HCI7 577 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 EMC7Q9NPA0 242 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 AP3M1Q9Y2T2 418 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 WIPI2Q9Y4P8 454 aa10.24□□□□□ -0.77
TTC3-208ENST00000428693 LOC105371242A0A075B767 164 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 TRAV20A0A0B4J274 112 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 NPIPB13A6NJU9 1138 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 C12orf71A8MTZ7 269 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 NPIPB4C9JG80 1138 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 PNPP00491 289 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 NGFP01138 241 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 HTR5AP47898 357 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 NUDT2P50583 147 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 ZNF133P52736 654 aaPredicted RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 ACTG1P63261 375 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 PRKCDQ05655 676 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 FGD3Q5JSP0 725 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 OTPQ5XKR4 325 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 C12orf54Q6X4T0 127 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 SLC15A3Q8IY34 581 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 OFCC1Q8IZS5 231 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 ZNF418Q8TF45 676 aaPredicted RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 ACOT11Q8WXI4 607 aaPredicted RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 NMD3Q96D46 503 aaKnown RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 MARS2Q96GW9 593 aaKnown RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 C4orf45Q96LM5 186 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 ZNF570Q96NI8 536 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 DCLRE1CQ96SD1 692 aaKnown RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 KCTD14Q9BQ13 255 aaPredicted RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 ELOVL3Q9HB03 270 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 MAN2C1Q9NTJ4 1040 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 NKIRAS2Q9NYR9 191 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 ADAM18Q9Y3Q7 739 aa10.23□□□□□ -0.77
TTC3-208ENST00000428693 FAM32AQ9Y421 112 aaKnown RBP10.23□□□□□ -0.77
TTC3-208ENST00000428693 A0A087WUU8 490 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 A0A0G2JMP0 313 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 A0A0X1KG70 313 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 HTR3EA5X5Y0 456 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 ZSCAN5BA6NJL1 495 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 NME4O00746 187 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 FFAR1O14842 300 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 PLPP2O43688 288 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 DOK2O60496 412 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 CCDC22O60826 627 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 GMNNO75496 209 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 IGHMP01871 453 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 TSPAN19P0C672 248 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 LCN2P80188 198 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 HNRNPA0Q13151 305 aaKnown RBP10.22□□□□□ -0.77
TTC3-208ENST00000428693 ZBED5Q49AG3 693 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 DCAF12L2Q5VW00 463 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 MBOAT2Q6ZWT7 520 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 CBLL1Q75N03 491 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 TREML1Q86YW5 311 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 RNF113BQ8IZP6 322 aaKnown RBP10.22□□□□□ -0.77
TTC3-208ENST00000428693 LRRC75AQ8NAA5 344 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 OR4M2Q8NGB6 313 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 FAM46AQ96IP4 442 aaKnown RBP10.22□□□□□ -0.77
TTC3-208ENST00000428693 Q96M85 177 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 HOPXQ9BPY8 73 aaPredicted RBP10.22□□□□□ -0.77
TTC3-208ENST00000428693 EFCAB1Q9HAE3 211 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 POLE4Q9NR33 117 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 CYSLTR2Q9NS75 346 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 IL20RAQ9UHF4 553 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 NDRG4Q9ULP0 352 aaKnown RBP10.22□□□□□ -0.77
TTC3-208ENST00000428693 PCDHB10Q9UN67 800 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 POLR1DQ9Y2S0 133 aa10.22□□□□□ -0.77
TTC3-208ENST00000428693 TEX13CA0A0J9YWL9 993 aa10.21□□□□□ -0.77
TTC3-208ENST00000428693 CDC42EP2O14613 210 aa10.21□□□□□ -0.77
TTC3-208ENST00000428693 SLC22A2O15244 555 aa10.21□□□□□ -0.77
TTC3-208ENST00000428693 SGCEO43556 437 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms