RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 OR13C5Q8NGS8 318 aa12.8□□□□□ -0.36
CDK3-201ENST00000425876 RNF133Q8WVZ7 376 aa12.8□□□□□ -0.36
CDK3-201ENST00000425876 HSD17B8Q92506 261 aa12.8□□□□□ -0.36
CDK3-201ENST00000425876 ZNF385AQ96PM9 386 aaKnown RBP12.8□□□□□ -0.36
CDK3-201ENST00000425876 SLC30A2Q9BRI3 323 aa12.8□□□□□ -0.36
CDK3-201ENST00000425876 COMMD4Q9H0A8 199 aa12.8□□□□□ -0.36
CDK3-201ENST00000425876 KLK13Q9UKR3 277 aa12.8□□□□□ -0.36
CDK3-201ENST00000425876 FREM2Q5SZK8 3169 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 TRBV5-5A0A0J9YX44 114 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 ZNF716A6NP11 495 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 LOC110117498-PIK3R3F6TDL0 507 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 RGS5O15539 181 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 CYTIPO60759 359 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 ZNF12P17014 697 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 MAPK3P27361 379 aaPredicted RBP12.79□□□□□ -0.36
CDK3-201ENST00000425876 DCTDP32321 178 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 MAGEA5P43359 124 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 EIF1AXP47813 144 aaKnown RBP12.79□□□□□ -0.36
CDK3-201ENST00000425876 TNFSF10P50591 281 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 ZNF766Q5HY98 468 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 CARD17Q5XLA6 110 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 MZT2AQ6P582 158 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 FOXL2NBQ6ZUU3 175 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 UBQLNLQ8IYU4 475 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 PARP16Q8N5Y8 322 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 RGP1Q92546 391 aaPredicted RBP12.79□□□□□ -0.36
CDK3-201ENST00000425876 ATF6BQ99941 703 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 SCNM1Q9BWG6 230 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.79□□□□□ -0.362e-15■■□□□ 13.3
CDK3-201ENST00000425876 ZCCHC4Q9H5U6 513 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 PAQR5Q9NXK6 330 aaPredicted RBP12.79□□□□□ -0.36
CDK3-201ENST00000425876 FOXD3Q9UJU5 478 aaPredicted RBP12.79□□□□□ -0.36
CDK3-201ENST00000425876 LRP12Q9Y561 859 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 FLVCR1Q9Y5Y0 555 aa12.79□□□□□ -0.36
CDK3-201ENST00000425876 KIAA1549Q9HCM3 1950 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 A0A1W2PPL8 197 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 TRABD2BA6NFA1 517 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 ANKRD61A6NGH8 418 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 FAM166BA8MTA8 275 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 GPR171O14626 319 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 TMEM127O75204 238 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 RAF1P04049 648 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 ZNF708P17019 499 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 CAV3P56539 151 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 CLDN18P56856 261 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 LSM6P62312 80 aaKnown RBP12.78□□□□□ -0.36
CDK3-201ENST00000425876 PPIAP62937 165 aaKnown RBP12.78□□□□□ -0.36
CDK3-201ENST00000425876 PPP3R1P63098 170 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 Q499Y3 187 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 HSD17B12Q53GQ0 312 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 OTPQ5XKR4 325 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 C20orf196Q8IYI0 205 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 PRSS35Q8N3Z0 413 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 FAM109AQ8N4B1 249 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 OR6N1Q8NGY5 312 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 DERL3Q96Q80 235 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 OR14A2Q96R54 314 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 C1orf198Q9H425 327 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 POLE4Q9NR33 117 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 UGT2A1Q9Y4X1 527 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 R4GMQ9 66 aa12.78□□□□□ -0.36
CDK3-201ENST00000425876 A0A0G2JK05 382 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 ACOT7O00154 380 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 SRSF10O75494 262 aaKnown RBP12.77□□□□□ -0.36
CDK3-201ENST00000425876 CEACAM4O75871 244 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 ACTL6AO96019 429 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 CELA3AP09093 270 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 RAB3BP20337 219 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 RFC3P40938 356 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 GUCA1AP43080 201 aaPredicted RBP12.77□□□□□ -0.36
CDK3-201ENST00000425876 KIR3DL2P43630 455 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 CCL11P51671 97 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 SLC10A1Q14973 349 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 WDR38Q5JTN6 314 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 NR2C2APQ86WQ0 139 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 CATSPERDQ86XM0 798 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 LAX1Q8IWV1 398 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 MEIOBQ8N635 442 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 ZNF676Q8N7Q3 588 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 FDCSPQ8NFU4 85 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 GPR148Q8TDV2 347 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 MIXL1Q9H2W2 232 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 SEC61A2Q9H9S3 476 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 ABCB9Q9NP78 766 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 NOX4Q9NPH5 578 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 LHFPL6Q9Y693 200 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 FRYQ5TBA9 3013 aa12.77□□□□□ -0.36
CDK3-201ENST00000425876 CACNA1CQ13936 2221 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 IGKV3D-15A0A087WSY6 115 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 SMIM30A4D0T7 59 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 NOTOA8MTQ0 251 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 PIN1P1O15428 100 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 DHHO43323 396 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 NCR1O76036 304 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 MMP16P51512 607 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 ZNF181Q2M3W8 571 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 OR7E24Q6IFN5 339 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 SFXN4Q6P4A7 337 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 FCRLAQ7L513 359 aa12.77□□□□□ -0.37
CDK3-201ENST00000425876 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms