RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CTXN1P60606 82 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 RPL27P61353 136 aaKnown RBP13.01□□□□□ -0.33
USB1-202ENST00000423271 HSF2Q03933 536 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 PPP1R8Q12972 351 aaKnown RBP13.01□□□□□ -0.33
USB1-202ENST00000423271 TBC1D28Q2M2D7 210 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 PABPC1L2AQ5JQF8 200 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 C1orf146Q5VVC0 180 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 OR2T5Q6IEZ7 315 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 TMPRSS11FQ6ZWK6 438 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 CPEB3Q8NE35 698 aaKnown RBP13.01□□□□□ -0.33
USB1-202ENST00000423271 OR2T29Q8NH02 315 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 ZNF519Q8TB69 540 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 SLCO4A1Q96BD0 722 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 RSRC1Q96IZ7 334 aaKnown RBP13.01□□□□□ -0.33
USB1-202ENST00000423271 ALG12Q9BV10 488 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 MS4A5Q9H3V2 200 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 SIAEQ9HAT2 523 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 SMURF2Q9HAU4 748 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 LPAR3Q9UBY5 353 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 ZNF346Q9UL40 294 aaKnown RBP13.01□□□□□ -0.33
USB1-202ENST00000423271 TMCC3Q9ULS5 477 aa13.01□□□□□ -0.33
USB1-202ENST00000423271 IQCMA0A1B0GVH7 501 aa13□□□□□ -0.33
USB1-202ENST00000423271 H7C1C5 153 aa13□□□□□ -0.33
USB1-202ENST00000423271 MGRN1O60291 552 aa13□□□□□ -0.33
USB1-202ENST00000423271 FKBP6O75344 327 aa13□□□□□ -0.33
USB1-202ENST00000423271 CIB2O75838 187 aa13□□□□□ -0.33
USB1-202ENST00000423271 KRT36O76013 467 aa13□□□□□ -0.33
USB1-202ENST00000423271 TGFAP01135 160 aa13□□□□□ -0.33
USB1-202ENST00000423271 LCKP06239 509 aa13□□□□□ -0.33
USB1-202ENST00000423271 COL8A2P25067 703 aa13□□□□□ -0.33
USB1-202ENST00000423271 SLC9A3P48764 834 aa13□□□□□ -0.33
USB1-202ENST00000423271 CHN2P52757 468 aa13□□□□□ -0.33
USB1-202ENST00000423271 HMGA2P52926 109 aa13□□□□□ -0.33
USB1-202ENST00000423271 LCN6P62502 163 aa13□□□□□ -0.33
USB1-202ENST00000423271 PLP2Q04941 152 aa13□□□□□ -0.33
USB1-202ENST00000423271 CCNIQ14094 377 aa13□□□□□ -0.33
USB1-202ENST00000423271 TAF11Q15544 211 aa13□□□□□ -0.33
USB1-202ENST00000423271 SGCAQ16586 387 aa13□□□□□ -0.33
USB1-202ENST00000423271 NKPD1Q17RQ9 610 aa13□□□□□ -0.33
USB1-202ENST00000423271 FAM120AOSQ5T036 256 aa13□□□□□ -0.33
USB1-202ENST00000423271 OAFQ86UD1 273 aa13□□□□□ -0.33
USB1-202ENST00000423271 ICA1LQ8NDH6 482 aa13□□□□□ -0.33
USB1-202ENST00000423271 OR4C15Q8NGM1 316 aa13□□□□□ -0.33
USB1-202ENST00000423271 AKR7LQ8NHP1 331 aa13□□□□□ -0.33
USB1-202ENST00000423271 GTF3AQ92664 365 aaKnown RBP13□□□□□ -0.33
USB1-202ENST00000423271 YIPF5Q969M3 257 aa13□□□□□ -0.33
USB1-202ENST00000423271 GPA33Q99795 319 aa13□□□□□ -0.33
USB1-202ENST00000423271 CCNB1IP1Q9NPC3 277 aa13□□□□□ -0.33
USB1-202ENST00000423271 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
USB1-202ENST00000423271 TAAR3PQ9P1P4 343 aa13□□□□□ -0.33
USB1-202ENST00000423271 ANK2Q01484 3957 aa13□□□□□ -0.33
USB1-202ENST00000423271 IGLV3-9A0A075B6K5 115 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 SLC22A23A1A5C7 686 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 RNF212BA8MTL3 300 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 OR10H3O60404 316 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 CST1P01037 141 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 PTHP01270 115 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 ZNF250P15622 560 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 ZNF26P17031 533 aaPredicted RBP12.99□□□□□ -0.33
USB1-202ENST00000423271 CCNOP22674 350 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 APLNRP35414 380 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 MAGEB1P43366 347 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 UCP2P55851 309 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 KLF3P57682 345 aaPredicted RBP12.99□□□□□ -0.33
USB1-202ENST00000423271 ERVK-25P63136 954 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 GLO1Q04760 184 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 ZER1Q7Z7L7 766 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 PAPD5Q8NDF8 572 aaKnown RBP12.99□□□□□ -0.33
USB1-202ENST00000423271 OR9Q2Q8NGE9 314 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 OR1J2Q8NGS2 313 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 SYNPRQ8TBG9 265 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 KCNN2Q9H2S1 579 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 REEP1Q9H902 201 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 SAMHD1Q9Y3Z3 626 aaKnown RBP12.99□□□□□ -0.33
USB1-202ENST00000423271 U3KQV3 271 aa12.99□□□□□ -0.33
USB1-202ENST00000423271 LOC100509620A0A075B734 347 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 A0A1W2PPL8 197 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 UNC119BA6NIH7 251 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 PHF1O43189 567 aaPredicted RBP12.98□□□□□ -0.33
USB1-202ENST00000423271 NR2C1P13056 603 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 HOXB6P17509 224 aaKnown RBP12.98□□□□□ -0.33
USB1-202ENST00000423271 STOMP27105 288 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 LAP3P28838 519 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 WNT5AP41221 380 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 PSG4Q00888 419 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 CR1LQ2VPA4 569 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 ZBED5Q49AG3 693 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 THEM4Q5T1C6 240 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 FAM27BQ5VT28 67 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 FAM205BPQ63HN1 556 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 PGBD2Q6P3X8 592 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 FOXL2NBQ6ZUU3 175 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 PHC2Q8IXK0 858 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 ZNF101Q8IZC7 436 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 OR1J1Q8NGS3 322 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 SPATA3Q8NHX4 192 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 RDH5Q92781 318 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 HPS1Q92902 700 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 POM121L2Q96KW2 1035 aa12.98□□□□□ -0.33
USB1-202ENST00000423271 RBP7Q96R05 134 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms