RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ALG12Q9BV10 488 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 OR2J1Q9GZK6 312 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 UBAP1Q9NZ09 502 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 HIF3AQ9Y2N7 669 aa13.72□□□□□ -0.21
COL18A1-205ENST00000423214 LOC100509620A0A075B734 347 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 ZSCAN5BA6NJL1 495 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 ATP8B1O43520 1251 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 TIMM8AO60220 97 aaPredicted RBP13.71□□□□□ -0.21
COL18A1-205ENST00000423214 AVPP01185 164 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 TSPAN19P0C672 248 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 COX4I1P13073 169 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 IFI30P13284 250 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 ADRA2CP18825 462 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 LIPAP38571 399 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 MMP15P51511 669 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 ARHGDIAP52565 204 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 RPL27P61353 136 aaKnown RBP13.71□□□□□ -0.21
COL18A1-205ENST00000423214 PCBD1P61457 104 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 PSG4Q00888 419 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 ST3GAL3Q11203 375 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 LAPTM4AQ15012 233 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 MBNL2Q5VZF2 373 aaKnown RBP13.71□□□□□ -0.21
COL18A1-205ENST00000423214 FAM205BPQ63HN1 556 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 SLC25A47Q6Q0C1 308 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 ARL9Q6T311 187 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 TREML1Q86YW5 311 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 RP9Q8TA86 221 aaKnown RBP13.71□□□□□ -0.21
COL18A1-205ENST00000423214 KLF14Q8TD94 323 aaPredicted RBP13.71□□□□□ -0.21
COL18A1-205ENST00000423214 TPD52L3Q96J77 140 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 PRRC1Q96M27 445 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 RBP7Q96R05 134 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 SLC6A7Q99884 636 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 OR2H1Q9GZK4 316 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 ELOVL3Q9HB03 270 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 CMTM6Q9NX76 183 aa13.71□□□□□ -0.21
COL18A1-205ENST00000423214 CCDC22O60826 627 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 IGHMP01871 453 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 CST2P09228 141 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 LAP3P28838 519 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 COMPP49747 757 aaPredicted RBP13.7□□□□□ -0.22
COL18A1-205ENST00000423214 CTXN1P60606 82 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 LCN2P80188 198 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 CYBRD1Q53TN4 286 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 FAM27BQ5VT28 67 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 IGFN1Q86VF2 1251 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 OR2T12Q8NG77 320 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 GEMIN6Q8WXD5 167 aaKnown RBP13.7□□□□□ -0.22
COL18A1-205ENST00000423214 NMD3Q96D46 503 aaKnown RBP13.7□□□□□ -0.22
COL18A1-205ENST00000423214 BPIFA2Q96DR5 249 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 DIRC2Q96SL1 478 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 FAM107BQ9H098 131 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 WNT5BQ9H1J7 359 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 ZDHHC8Q9ULC8 765 aa13.7□□□□□ -0.22
COL18A1-205ENST00000423214 ELOVL7A1L3X0 281 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 TMEM89A2RUT3 159 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 A6NIZ1 184 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 FAM220BPB1ANY3 271 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 SLC22A2O15244 555 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 SPRY1O43609 319 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-205ENST00000423214 UBOX5O94941 541 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 ABHD16AO95870 558 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 ADH4P08319 380 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 GSTM3P21266 225 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 MSR1P21757 451 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 KDELR2P33947 212 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 RAP1BP61224 184 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 RAP1AP62834 184 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 TNFAIP6P98066 277 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-205ENST00000423214 TMEM255AQ5JRV8 349 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 ZNF774Q6NX45 483 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 ZER1Q7Z7L7 766 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 SLC15A3Q8IY34 581 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 MICU2Q8IYU8 434 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 CLDN22Q8N7P3 220 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 NPEPL1Q8NDH3 523 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 NDRG4Q9ULP0 352 aaKnown RBP13.69□□□□□ -0.22
COL18A1-205ENST00000423214 TIMM10BQ9Y5J6 103 aa13.69□□□□□ -0.22
COL18A1-205ENST00000423214 TRAV27A0A087WT01 109 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 HTR3EA5X5Y0 456 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 C12orf71A8MTZ7 269 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 PRSS23O95084 383 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 TNFSF4P23510 183 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 FPR2P25090 351 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 GYS2P54840 703 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 ARMCX4Q5H9R4 360 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 MTX3Q5HYI7 312 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 LZICQ8WZA0 190 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 C4orf45Q96LM5 186 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 MSL2Q9HCI7 577 aa13.68□□□□□ -0.22
COL18A1-205ENST00000423214 DOK2O60496 412 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 ICMTO60725 284 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 FOXH1O75593 365 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 NGFP01138 241 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 CD55P08174 381 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 HTR5AP47898 357 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 LIPEQ05469 1076 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 FOXL2NBQ6ZUU3 175 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 OAFQ86UD1 273 aa13.67□□□□□ -0.22
COL18A1-205ENST00000423214 NRMQ8IXM6 262 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms