RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 TRAV27A0A087WT01 109 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 ISPDA4D126 451 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 A6NIZ1 184 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 ZSCAN5BA6NJL1 495 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 TRIM77I1YAP6 450 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 J3QLI3 93 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 ICMTO60725 284 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 ARHGDIAP52565 204 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 ARFIP2P53365 341 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 HILS1P60008 231 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 RAP1BP61224 184 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 RAP1AP62834 184 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 SELENOWP63302 87 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 ZMAT1Q5H9K5 638 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 FOXL2NBQ6ZUU3 175 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 LRRC75AQ8NAA5 344 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 JMJD8Q96S16 334 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 SAR1AQ9NR31 198 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 ZDHHC8Q9ULC8 765 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 TIMM10BQ9Y5J6 103 aa14.67□□□□□ -0.06
PTCD1-202ENST00000419981 LOC100653049A0A140TA62 436 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 ELOVL7A1L3X0 281 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 KRT34O76011 436 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 UBOX5O94941 541 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 NGFP01138 241 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 ADH4P08319 380 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 MSR1P21757 451 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 GATA3P23771 443 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 SF3A3Q12874 501 aaKnown RBP eCLIP14.66□□□□□ -0.06
PTCD1-202ENST00000419981 ANKDD1AQ495B1 522 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 ZNF774Q6NX45 483 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 ARL9Q6T311 187 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 ZNF771Q7L3S4 317 aaPredicted RBP14.66□□□□□ -0.06
PTCD1-202ENST00000419981 PEG10Q86TG7 708 aaKnown RBP14.66□□□□□ -0.06
PTCD1-202ENST00000419981 NRMQ8IXM6 262 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 OFCC1Q8IZS5 231 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 OR51A7Q8NH64 312 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 FAM216AQ8WUB2 273 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 C4orf45Q96LM5 186 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 DIRC2Q96SL1 478 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 FNDC11Q9BVV2 318 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 FGFR1OP2Q9NVK5 253 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 RHCGQ9UBD6 479 aa14.66□□□□□ -0.06
PTCD1-202ENST00000419981 C12orf71A8MTZ7 269 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 IFNW1P05000 195 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 ADRA2CP18825 462 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 YAP1P46937 504 aaKnown RBP14.65□□□□□ -0.06
PTCD1-202ENST00000419981 SLC9A3P48764 834 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 ENDOGQ14249 297 aaKnown RBP14.65□□□□□ -0.06
PTCD1-202ENST00000419981 TRAM2Q15035 370 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 ZER1Q7Z7L7 766 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 SYT9Q86SS6 491 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 OAFQ86UD1 273 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 NANPQ8TBE9 248 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 GEMIN6Q8WXD5 167 aaKnown RBP14.65□□□□□ -0.06
PTCD1-202ENST00000419981 RBM4Q9BWF3 364 aaKnown RBP14.65□□□□□ -0.06
PTCD1-202ENST00000419981 SUCNR1Q9BXA5 334 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 MSL2Q9HCI7 577 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 MAN2C1Q9NTJ4 1040 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 UBAP1Q9NZ09 502 aa14.65□□□□□ -0.06
PTCD1-202ENST00000419981 NDRG4Q9ULP0 352 aaKnown RBP14.65□□□□□ -0.06
PTCD1-202ENST00000419981 TENM1Q9UKZ4 2725 aa14.65□□□□□ -0.07
PTCD1-202ENST00000419981 EFCAB9A8MZ26 197 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 H7C1C5 153 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 J3KTA2 159 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 TIMM8AO60220 97 aaPredicted RBP14.64□□□□□ -0.07
PTCD1-202ENST00000419981 ABHD16AO95870 558 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 CD55P08174 381 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 FUT4P22083 530 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 LCN6P62502 163 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 PRKCDQ05655 676 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 MTX3Q5HYI7 312 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 VTCN1Q7Z7D3 282 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 OR13C2Q8NGS9 318 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 ST7LQ8TDW4 575 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 GCDHQ92947 438 aaPredicted RBP14.64□□□□□ -0.07
PTCD1-202ENST00000419981 POLE4Q9NR33 117 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 KLHL21Q9UJP4 597 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 AP3M1Q9Y2T2 418 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 SNX13Q9Y5W8 968 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 CAPN7Q9Y6W3 813 aa14.64□□□□□ -0.07
PTCD1-202ENST00000419981 TMEM89A2RUT3 159 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 DOK2O60496 412 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 COX5BP10606 129 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 H2AFXP16104 143 aaPredicted RBP14.63□□□□□ -0.07
PTCD1-202ENST00000419981 GSTM3P21266 225 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 LIMS1P48059 325 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 COMPP49747 757 aaPredicted RBP14.63□□□□□ -0.07
PTCD1-202ENST00000419981 LCN2P80188 198 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 TNFAIP6P98066 277 aaPredicted RBP14.63□□□□□ -0.07
PTCD1-202ENST00000419981 FHL1Q13642 323 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 CGB2Q6NT52 195 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 ZNF730Q6ZMV8 503 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 ARPINQ7Z6K5 226 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 TREML1Q86YW5 311 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 RNF113BQ8IZP6 322 aaKnown RBP14.63□□□□□ -0.07
PTCD1-202ENST00000419981 BPIFB2Q8N4F0 458 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 NPEPL1Q8NDH3 523 aa14.63□□□□□ -0.07
PTCD1-202ENST00000419981 ACOT11Q8WXI4 607 aaPredicted RBP14.63□□□□□ -0.07
PTCD1-202ENST00000419981 RCN3Q96D15 328 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms