RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 THOC3Q96J01 351 aaKnown RBP15.23■□□□□ 0.03
PTPRC-206ENST00000413409 TTTY10Q9BZA0 68 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 PLA2G3Q9NZ20 509 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 VDAC3Q9Y277 283 aa15.23■□□□□ 0.03
PTPRC-206ENST00000413409 CHCHD2Q9Y6H1 151 aaPredicted RBP15.23■□□□□ 0.03
PTPRC-206ENST00000413409 FBN1P35555 2871 aaKnown RBP15.23■□□□□ 0.03
PTPRC-206ENST00000413409 RTTNQ86VV8 2226 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 FN1P02751 2386 aaKnown RBP15.22■□□□□ 0.03
PTPRC-206ENST00000413409 NSG1A0A0A6YYJ2 146 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 TRBV2A0A0J9YWF9 115 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 C2orf72A6NCS6 295 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 LIPT2A6NK58 231 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 FAM171A2A8MVW0 826 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 DVL2O14641 736 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 KRT8P05787 483 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 AHCYP23526 432 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 CRABP1P29762 137 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 EIF1P41567 113 aaKnown RBP15.22■□□□□ 0.03
PTPRC-206ENST00000413409 SSR4P51571 173 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 CAV3P56539 151 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 SELENBP1Q13228 472 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 DNM1P34Q6PK57 102 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 UNQ9370/PRO34162Q6UXP9 181 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 ZNF554Q86TJ5 538 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 OR4K17Q8NGC6 315 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 ASB10Q8WXI3 467 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 ZBTB8AQ96BR9 441 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 DIRAS2Q96HU8 199 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 SOSTQ9BQB4 213 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 SRA1Q9HD15 236 aaKnown RBP15.22■□□□□ 0.03
PTPRC-206ENST00000413409 SH2D2AQ9NP31 389 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 ABI3Q9P2A4 366 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 LAMP5Q9UJQ1 280 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 B9D1Q9UPM9 204 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 B3GALT5Q9Y2C3 310 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 KLHDC2Q9Y2U9 406 aa15.22■□□□□ 0.03
PTPRC-206ENST00000413409 ARPC4-TTLL3A0A0A6YYG9 625 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 A0A0G2JK05 382 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 SLC22A23A1A5C7 686 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 SMIM30A4D0T7 59 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 KIAA1324LA8MWY0 1029 aaPredicted RBP15.21■□□□□ 0.03
PTPRC-206ENST00000413409 PRR32B1ATL7 298 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 TMEM127O75204 238 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 NCR1O76036 304 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 AKR7A3O95154 331 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 IMPDH2P12268 514 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 ALOX5APP20292 161 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 SHC1P29353 583 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 TNFSF10P50591 281 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 RPS11P62280 158 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTPRC-206ENST00000413409 OR7A5Q15622 319 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 YIF1BQ5BJH7 314 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 SFXN4Q6P4A7 337 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 FAM131AQ6UXB0 335 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 OR6N2Q8NGY6 317 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 ASB17Q8WXJ9 295 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 RNF166Q96A37 237 aaPredicted RBP15.21■□□□□ 0.03
PTPRC-206ENST00000413409 NPAS1Q99742 590 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 FOXC2Q99958 501 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 PPIL3Q9H2H8 161 aaKnown RBP15.21■□□□□ 0.03
PTPRC-206ENST00000413409 PTGES2Q9H7Z7 377 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 MRM2Q9UI43 246 aaKnown RBP15.21■□□□□ 0.03
PTPRC-206ENST00000413409 ZNF281Q9Y2X9 895 aa15.21■□□□□ 0.03
PTPRC-206ENST00000413409 FABP12A6NFH5 140 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 TVP23AA6NH52 213 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 CENPBD1B2RD01 187 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 ZNF879B4DU55 563 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 NPIPA5E9PKD4 350 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 MS4A18H0YCH9 400 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 SEC14L5O43304 696 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 UPK3AO75631 287 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 PLGP00747 810 aaPredicted RBP15.2■□□□□ 0.02
PTPRC-206ENST00000413409 APOA1P02647 267 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 CELA2AP08217 269 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 MLF1P58340 268 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 ARG2P78540 354 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 ZNF239Q16600 458 aaKnown RBP15.2■□□□□ 0.02
PTPRC-206ENST00000413409 MS4A18Q3C1V0 323 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 Q71RC1 249 aaPredicted RBP15.2■□□□□ 0.02
PTPRC-206ENST00000413409 NR2C2APQ86WQ0 139 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 PRIMA1Q86XR5 153 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 ZNF454Q8N9F8 522 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 OTOSQ8NHW6 89 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 PAQR8Q8TEZ7 354 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 ARL5BQ96KC2 179 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 ADAD1Q96M93 576 aaKnown RBP15.2■□□□□ 0.02
PTPRC-206ENST00000413409 ANGPTL4Q9BY76 406 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.2■□□□□ 0.02
PTPRC-206ENST00000413409 POLE4Q9NR33 117 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 COMMD3Q9UBI1 195 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 NPIPA1Q9UND3 350 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 PCNX3Q9H6A9 2034 aa15.2■□□□□ 0.02
PTPRC-206ENST00000413409 TRAV17A0A0B4J275 112 aa15.19■□□□□ 0.02
PTPRC-206ENST00000413409 SNPHO15079 494 aa15.19■□□□□ 0.02
PTPRC-206ENST00000413409 MAGEB4O15481 346 aaPredicted RBP15.19■□□□□ 0.02
PTPRC-206ENST00000413409 HPGDSO60760 199 aa15.19■□□□□ 0.02
PTPRC-206ENST00000413409 ZNF432O94892 652 aa15.19■□□□□ 0.02
PTPRC-206ENST00000413409 HPP00738 406 aa15.19■□□□□ 0.02
PTPRC-206ENST00000413409 F10P00742 488 aa15.19■□□□□ 0.02
PTPRC-206ENST00000413409 OR8G3PP0DMU2 310 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms