RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ATE1O95260 518 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 IGHV3-9P01782 118 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 TPOP07202 933 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 CELP19835 753 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 TGM4P49221 684 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 GBX2P52951 348 aaPredicted RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 LSM6P62312 80 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 RPS25P62851 125 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 MRPS34P82930 218 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 ROR2Q01974 943 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 MRPL28Q13084 256 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 ENDOGQ14249 297 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 CDK5R1Q15078 307 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 STK11Q15831 433 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 CEACAM16Q2WEN9 425 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 TIMM50Q3ZCQ8 353 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 CCDC58Q4VC31 144 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 KRTCAP3Q53RY4 240 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 PRR30Q53SZ7 412 aaPredicted RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 TSPO2Q5TGU0 170 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 NSUN5P2Q63ZY6 315 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 OR7E24Q6IFN5 339 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 ZNF585AQ6P3V2 769 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 CORO6Q6QEF8 472 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 LRRN1Q6UXK5 716 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 CFAP77Q6ZQR2 320 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 PLEKHG7Q6ZR37 379 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 NUFIP2Q7Z417 695 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 DCXRQ7Z4W1 244 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 KCTD20Q7Z5Y7 419 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 CD163Q86VB7 1156 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 EGFL6Q8IUX8 553 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 ZNF679Q8IYX0 411 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 CISD2Q8N5K1 135 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 YIPF7Q8N8F6 280 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 C9orf106Q8NAJ2 232 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 OR10S1Q8NGN2 331 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 RPS4Y2Q8TD47 263 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 HAVCR2Q8TDQ0 301 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 THEM6Q8WUY1 208 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 RNF133Q8WVZ7 376 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 HSD17B8Q92506 261 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 WNT2BQ93097 391 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 SMIM19Q96E16 107 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 ZNF837Q96EG3 531 aaPredicted RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 TRMT61AQ96FX7 289 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 MAP6Q96JE9 813 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 PGLYRP3Q96LB9 341 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 CHCHD6Q9BRQ6 235 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 ZNF416Q9BWM5 594 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 RBM24Q9BX46 236 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 OR51E2Q9H255 320 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 GLRX2Q9NS18 164 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 SLC7A10Q9NS82 523 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 TMEM38BQ9NVV0 291 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 SLCO1C1Q9NYB5 712 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 ASH2LQ9UBL3 628 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 GDF2Q9UK05 429 aaPredicted RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 IKZF2Q9UKS7 526 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 STUB1Q9UNE7 303 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 SF3B6Q9Y3B4 125 aaKnown RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 LRP12Q9Y561 859 aa5.86□□□□□ -1.47
VPS41-204ENST00000413141 SIRT4Q9Y6E7 314 aaPredicted RBP5.86□□□□□ -1.47
VPS41-204ENST00000413141 LOC100506127A0A0U1RQW1 187 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 A0A1W2PPW3 197 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 MBD3L4A6NDZ8 208 aaPredicted RBP5.85□□□□□ -1.47
VPS41-204ENST00000413141 MBD3L3A6NE82 208 aaPredicted RBP5.85□□□□□ -1.47
VPS41-204ENST00000413141 MBD3L5A6NJ08 208 aaPredicted RBP5.85□□□□□ -1.47
VPS41-204ENST00000413141 CD8B2A6NJW9 211 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 FIGNL2A6NMB9 653 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 ZNF878C9JN71 531 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 ZNF587BE7ETH6 402 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 RPL36A-HNRNPH2H7BZ11 118 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 GPR37O15354 613 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 OGG1O15527 345 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 PLPP2O43688 288 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 TMCC2O75069 709 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 WDR1O75083 606 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 GPX5O75715 221 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 KRT33AO76009 404 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 RPP14O95059 124 aaKnown RBP5.85□□□□□ -1.47
VPS41-204ENST00000413141 CD1AP06126 327 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 TACSTD2P09758 323 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 GABRA1P14867 456 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 B4GALT1P15291 398 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 CD53P19397 219 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 NPR2P20594 1047 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 PSMA1P25786 263 aaKnown RBP5.85□□□□□ -1.47
VPS41-204ENST00000413141 PCSK6P29122 969 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 PTGER4P35408 488 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 TGFBR1P36897 503 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 PSMB10P40306 273 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 OPRL1P41146 370 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 GUCA1AP43080 201 aaPredicted RBP5.85□□□□□ -1.47
VPS41-204ENST00000413141 CRYBB2P43320 205 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 OR3A2P47893 321 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 GDI2P50395 445 aaKnown RBP5.85□□□□□ -1.47
VPS41-204ENST00000413141 NANOS3P60323 173 aaKnown RBP5.85□□□□□ -1.47
VPS41-204ENST00000413141 VBP1P61758 197 aa5.85□□□□□ -1.47
VPS41-204ENST00000413141 NCS1P62166 190 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms